RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TMEM185BQ9H7F4 350 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 PTGES2Q9H7Z7 377 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 TAS2R13Q9NYV9 303 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 STOML1Q9UBI4 398 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 CFL2Q9Y281 166 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 PLLPQ9Y342 182 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 WNT9BO14905 357 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 PGRMC2O15173 223 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 GMFGO60234 142 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 TSPAN2O60636 221 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 TGFB1P01137 390 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 PTMAP06454 111 aaKnown RBP10.33□□□□□ -0.76
USP11-208ENST00000480104 PABPC4LP0CB38 370 aaKnown RBP10.33□□□□□ -0.76
USP11-208ENST00000480104 SAGP10523 405 aaPredicted RBP10.33□□□□□ -0.76
USP11-208ENST00000480104 DRD5P21918 477 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 IL12BP29460 328 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 PPICP45877 212 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 IL2P60568 153 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 DOC2BQ14184 412 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 RUSC1-AS1Q66K80 236 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 FAM111BQ6SJ93 734 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 CARM1Q86X55 608 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 ZCCHC24Q8N2G6 241 aaKnown RBP10.33□□□□□ -0.76
USP11-208ENST00000480104 RNF10Q8N5U6 811 aaKnown RBP10.33□□□□□ -0.76
USP11-208ENST00000480104 ZNF433Q8N7K0 673 aaPredicted RBP10.33□□□□□ -0.76
USP11-208ENST00000480104 ALG3Q92685 438 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 OSTF1Q92882 214 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 RTN4RQ9BZR6 473 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 OR51B5Q9H339 312 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 SLC52A3Q9NQ40 469 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 IARS2Q9NSE4 1012 aaKnown RBP10.33□□□□□ -0.76
USP11-208ENST00000480104 NTMQ9P121 344 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 MCM8Q9UJA3 840 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 MID2Q9UJV3 735 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 ASB4Q9Y574 426 aa10.33□□□□□ -0.76
USP11-208ENST00000480104 HEATR1Q9H583 2144 aaKnown RBP10.33□□□□□ -0.76
USP11-208ENST00000480104 LYSTQ99698 3801 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 A0A0G2JMP0 313 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 A0A0X1KG70 313 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 TCRBV7S2A1N4TA0A589 114 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 CLGNO14967 610 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 NDUFB5O43674 189 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 TMPRSS11DO60235 418 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 IL33O95760 270 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 YES1P07947 543 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 PIK3R1P27986 724 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 PCGF2P35227 344 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 CETN2P41208 172 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 KRTAP10-3P60369 221 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 DHX34Q14147 1143 aaKnown RBP10.32□□□□□ -0.76
USP11-208ENST00000480104 RBM20Q5T481 1227 aaKnown RBP10.32□□□□□ -0.76
USP11-208ENST00000480104 SAMD5Q5TGI4 173 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 KHDRBS2Q5VWX1 349 aaKnown RBP10.32□□□□□ -0.76
USP11-208ENST00000480104 OR52E8Q6IFG1 317 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 ESPNLQ6ZVH7 1005 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 SPATC1Q76KD6 591 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 ZCCHC7Q8N3Z6 543 aaKnown RBP10.32□□□□□ -0.76
USP11-208ENST00000480104 OR4M2Q8NGB6 313 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 OR52R1Q8NGF1 315 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 UBASH3BQ8TF42 649 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 NEU4Q8WWR8 484 aaPredicted RBP10.32□□□□□ -0.76
USP11-208ENST00000480104 EFHD2Q96C19 240 aaPredicted RBP10.32□□□□□ -0.76
USP11-208ENST00000480104 REXO5Q96IC2 774 aaKnown RBP10.32□□□□□ -0.76
USP11-208ENST00000480104 NPAS1Q99742 590 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 EGFL8Q99944 293 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 SRXN1Q9BYN0 137 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 BRINP2Q9C0B6 783 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 RACGAP1Q9H0H5 632 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 PLK3Q9H4B4 646 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 FBXO9Q9UK97 447 aaPredicted RBP10.32□□□□□ -0.76
USP11-208ENST00000480104 FBXO5Q9UKT4 447 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 VDAC3Q9Y277 283 aa10.32□□□□□ -0.76
USP11-208ENST00000480104 B9A039 149 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 PLPP1O14494 284 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 CBX7O95931 251 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 ZSCAN5DPP0CG00 497 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 STIP1P31948 543 aaKnown RBP10.31□□□□□ -0.76
USP11-208ENST00000480104 KRT20P35900 424 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 RAP1GDS1P52306 607 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 RWDD2BP57060 319 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 CARD18P57730 90 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 CORO7P57737 925 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 LMO4P61968 165 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 IL1RL1Q01638 556 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 MGAT2Q10469 447 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 SLC9A3R2Q15599 337 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 ARL13AQ5H913 290 aaPredicted RBP10.31□□□□□ -0.76
USP11-208ENST00000480104 MRM1Q6IN84 353 aaKnown RBP10.31□□□□□ -0.76
USP11-208ENST00000480104 RBM43Q6ZSC3 357 aaKnown RBP10.31□□□□□ -0.76
USP11-208ENST00000480104 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.31□□□□□ -0.76
USP11-208ENST00000480104 ZNF669Q96BR6 464 aaPredicted RBP10.31□□□□□ -0.76
USP11-208ENST00000480104 PTCD3Q96EY7 689 aaKnown RBP10.31□□□□□ -0.76
USP11-208ENST00000480104 LRRC1Q9BTT6 524 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 EFCAB11Q9BUY7 163 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 WDR41Q9HAD4 459 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 GP6Q9HCN6 339 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 LYARQ9NX58 379 aaKnown RBP10.31□□□□□ -0.76
USP11-208ENST00000480104 MAT2BQ9NZL9 334 aa10.31□□□□□ -0.76
USP11-208ENST00000480104 GPR55Q9Y2T6 319 aaPredicted RBP10.31□□□□□ -0.76
USP11-208ENST00000480104 PCNX3Q9H6A9 2034 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms