RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	SOCS6	O14544	535 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	FFAR1	O14842	300 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	T	O15178	435 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	REM1	O75628	298 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	IL33	O95760	270 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	IGHE	P01854	428 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	COX6A1	P12074	109 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	NID1	P14543	1247 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	RHCE	P18577	417 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	RBMS1	P29558	406 aa	Known RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	OTX2	P32243	289 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	STAT5A	P42229	794 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	ATP12A	P54707	1039 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	DNASE1L3	Q13609	305 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	SSPN	Q14714	243 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	LAPTM4A	Q15012	233 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	BTBD16	Q32M84	506 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	LIN52	Q52LA3	116 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	MRPL2	Q5T653	305 aa	Known RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	TMPRSS7	Q7RTY8	843 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	OR11G2	Q8NGC1	345 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	OR52J3	Q8NH60	311 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	DNAJC9	Q8WXX5	260 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	IMMP1L	Q96LU5	166 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	ADO	Q96SZ5	270 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	BARD1	Q99728	777 aa	Known RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	PIP5K1A	Q99755	562 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	REEP1	Q9H902	201 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	KLHL28	Q9NXS3	571 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	FLRT3	Q9NZU0	649 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	CDV3	Q9UKY7	258 aa	Known RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	CNOT11	Q9UKZ1	510 aa	Known RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	SAMHD1	Q9Y3Z3	626 aa	Known RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	LRRC42	Q9Y546	428 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	CUL9	Q8IWT3	2517 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	C7orf72	A4D263	438 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	TMEM200C	A6NKL6	621 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	NPIPB9	F8W1W9	429 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	MASP2	O00187	686 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	TNFRSF11B	O00300	401 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	WWP2	O00308	870 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	EI24	O14681	340 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	TPST2	O60704	377 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	DPM1	O60762	260 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	BCAS1	O75363	584 aa	Predicted RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	DNAJB5	O75953	348 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	ZFAND5	O76080	213 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	CELA2A	P08217	269 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	ABCD3	P28288	659 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	DNAJA1	P31689	397 aa	Known RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	CDH12	P55289	794 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	HOXC5	Q00444	222 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	SPIB	Q01892	262 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	PIN1	Q13526	163 aa	Predicted RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	NPTX1	Q15818	432 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	ZNF141	Q15928	474 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	ANKRD34A	Q69YU3	496 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	PPP1R32	Q7Z5V6	425 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	C17orf47	Q8NEP4	570 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	MAGEE2	Q8TD90	523 aa	Predicted RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	DIO2	Q92813	273 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	TP53INP1	Q96A56	240 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	HSPBAP1	Q96EW2	488 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	ZNF184	Q99676	751 aa	Predicted RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	CTPS2	Q9NRF8	586 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	ACER3	Q9NUN7	267 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	MRTO4	Q9UKD2	239 aa	Known RBP	10.34	□□□□□ -0.75
APTX-223	ENST00000479656	PCDHGA10	Q9Y5H3	936 aa		10.34	□□□□□ -0.75
APTX-223	ENST00000479656	KNTC1	P50748	2209 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	CDHR4	A6H8M9	788 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	CDRT15L2	A8MXV6	281 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	C21orf140	B9A014	251 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	TERT	O14746	1132 aa	Known RBP	10.33	□□□□□ -0.76
APTX-223	ENST00000479656	PCDH17	O14917	1159 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	ADAMDEC1	O15204	470 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	TSPAN2	O60636	221 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	ZNF354A	O60765	605 aa	Predicted RBP	10.33	□□□□□ -0.76
APTX-223	ENST00000479656	ABCB7	O75027	752 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	GADD45G	O95257	159 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	RASAL1	O95294	804 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	GKN3P	P0CG01	181 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	KRT20	P35900	424 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	ARHGDIA	P52565	204 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	PSMD4	P55036	377 aa	Known RBP	10.33	□□□□□ -0.76
APTX-223	ENST00000479656	PLCXD2	Q0VAA5	305 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	EIPR1	Q53HC9	387 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	SHQ1	Q6PI26	577 aa	Known RBP	10.33	□□□□□ -0.76
APTX-223	ENST00000479656	NDUFAF7	Q7L592	441 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	ZNF605	Q86T29	641 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	TSPYL5	Q86VY4	417 aa	Predicted RBP	10.33	□□□□□ -0.76
APTX-223	ENST00000479656	CYP4Z1	Q86W10	505 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	HIPK1	Q86Z02	1210 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	SVOPL	Q8N434	492 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	OR5L2	Q8NGL0	311 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	OR8K3	Q8NH51	312 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	NUBPL	Q8TB37	319 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	ELP5	Q8TE02	316 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	NKD1	Q969G9	470 aa		10.33	□□□□□ -0.76
APTX-223	ENST00000479656	SDCCAG3	Q96C92	435 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms