RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZFP41Q8N8Y5 198 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 OR7G2Q8NG99 324 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 LILRB4Q8NHJ6 448 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 SPRYD4Q8WW59 207 aaPredicted RBP22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 RIPOR3Q96MK2 946 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 SECISBP2Q96T21 854 aaKnown RBP22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 TMED9Q9BVK6 235 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 SLC17A9Q9BYT1 436 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 SFXN1Q9H9B4 322 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 KLHL21Q9UJP4 597 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 TTC36A6NLP5 189 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 CH25HO95992 272 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 CD53P19397 219 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 LTB4RQ15722 352 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 EOGTQ5NDL2 527 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 TIGD3Q6B0B8 471 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 VN1R4Q7Z5H5 301 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 AMIGO1Q86WK6 493 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 CACUL1Q86Y37 369 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 LIX1LQ8IVB5 337 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 SLC16A11Q8NCK7 471 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 TMEM255BQ8WV15 326 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 RNF170Q96K19 258 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 APOOQ9BUR5 198 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 UBQLN3Q9H347 655 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 SYNPO2LQ9H987 977 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 TBC1D17Q9HA65 648 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 ISM1B1AKI9 464 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 SGK494L7N484 410 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 HPGDSO60760 199 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 APEX1P27695 318 aaKnown RBP22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 IGFALSP35858 605 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 MTNR1BP49286 362 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 EEF1A1P68104 462 aaKnown RBP22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 RPL13AP3Q6NVV1 102 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 FAM111BQ6SJ93 734 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 ZNF836Q6ZNA1 936 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 CXXC5Q7LFL8 322 aaKnown RBP22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 NOXA1Q86UR1 476 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 TCTE3Q8IZS6 198 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 OR4K14Q8NGD5 310 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 HERVK_113Q902F9 699 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 CDS1Q92903 461 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 FAM131CQ96AQ9 280 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 SLC22A18Q96BI1 424 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 OTULINQ96BN8 352 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 TMEM43Q9BTV4 400 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 HDHD5Q9BXW7 423 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 SLA2Q9H6Q3 261 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 HINT3Q9NQE9 182 aaKnown RBP22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 INPP5EQ9NRR6 644 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 KLF15Q9UIH9 416 aa22.96■■□□□ 1.27
SYNGAP1-206ENST00000479510 TRAPPC13A5PLN9 417 aa22.95■■□□□ 1.26
SYNGAP1-206ENST00000479510 GCGRP47871 477 aa22.95■■□□□ 1.26
SYNGAP1-206ENST00000479510 SF3A2Q15428 464 aaKnown RBP22.95■■□□□ 1.26
SYNGAP1-206ENST00000479510 TANGO2Q6ICL3 276 aa22.95■■□□□ 1.26
SYNGAP1-206ENST00000479510 ACBD7Q8N6N7 88 aa22.95■■□□□ 1.26
SYNGAP1-206ENST00000479510 ZNF784Q8NCA9 323 aaPredicted RBP22.95■■□□□ 1.26
SYNGAP1-206ENST00000479510 UBL7Q96S82 380 aaPredicted RBP22.95■■□□□ 1.26
SYNGAP1-206ENST00000479510 SERINC2Q96SA4 455 aa22.95■■□□□ 1.26
SYNGAP1-206ENST00000479510 SLC7A7Q9UM01 511 aa22.95■■□□□ 1.26
SYNGAP1-206ENST00000479510 UNC119BA6NIH7 251 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 LRRTM2O43300 516 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 SCO2O43819 266 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 RGS9O75916 674 aaPredicted RBP22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 CAV3P56539 151 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 ZNF791Q3KP31 576 aaPredicted RBP22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 VASNQ6EMK4 673 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 C11orf74Q86VG3 221 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 CPOQ8IVL8 374 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 LCN9Q8WX39 176 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 SAMD8Q96LT4 415 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 KCNJ15Q99712 375 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 TRAF4Q9BUZ4 470 aaPredicted RBP22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 KCMF1Q9P0J7 381 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 NUFIP1Q9UHK0 495 aaKnown RBP22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 MOSPD1Q9UJG1 213 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 NTNG1Q9Y2I2 539 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 MYO7AQ13402 2215 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 A0A1W2PQU0 124 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 PLRG1O43660 514 aaKnown RBP22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 FMO6PO60774 539 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 NTN1O95631 604 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 HOXC4P09017 264 aaPredicted RBP22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 ZNF888P0CJ79 500 aaPredicted RBP22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 RPS4Y1P22090 263 aaKnown RBP22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 ZNF136P52737 540 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 HTRA3P83110 453 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 HOXC5Q00444 222 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 SUZ12Q15022 739 aaKnown RBP22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 SPRED2Q7Z698 418 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 BBS1Q8NFJ9 593 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 OR52L1Q8NGH7 329 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 BADQ92934 168 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 RNF32Q9H0A6 362 aa22.94■■□□□ 1.26
SYNGAP1-206ENST00000479510 A0A0B4J293 547 aa22.93■■□□□ 1.26
SYNGAP1-206ENST00000479510 FAM25AB3EWG3 89 aa22.93■■□□□ 1.26
SYNGAP1-206ENST00000479510 FAM25CB3EWG5 89 aa22.93■■□□□ 1.26
SYNGAP1-206ENST00000479510 FAM25GB3EWG6 89 aa22.93■■□□□ 1.26
SYNGAP1-206ENST00000479510 PIP5K1CO60331 668 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms