RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ADAMDEC1O15204 470 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 SLC25A16P16260 332 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 CLK3P49761 638 aaKnown RBP18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 SGO1Q5FBB7 561 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 SFRP5Q5T4F7 317 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 MARCH3Q86UD3 253 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 LRRC8AQ8IWT6 810 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 C1orf52Q8N6N3 182 aaKnown RBP18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 PPM1NQ8N819 430 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 OR2V1Q8NHB1 315 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 ADAD1Q96M93 576 aaKnown RBP18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 FARSBQ9NSD9 589 aaKnown RBP18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 FBXO34Q9NWN3 711 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 CISD1Q9NZ45 108 aaKnown RBP18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 PCTPQ9UKL6 214 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 PCNX3Q9H6A9 2034 aa18.01■□□□□ 0.47
PDLIM1-202ENST00000477757 DPRXA6NFQ7 191 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 UBFD1O14562 309 aaKnown RBP18■□□□□ 0.47
PDLIM1-202ENST00000477757 EIF3HO15372 352 aaKnown RBP eCLIP18■□□□□ 0.47
PDLIM1-202ENST00000477757 COQ9O75208 318 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 GSTA2P09210 222 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 RUNX1T1Q06455 604 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 SH2D4BQ5SQS7 431 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 C3orf62Q6ZUJ4 267 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 FAM9CQ8IZT9 166 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 GTPBP8Q8N3Z3 284 aaPredicted RBP18■□□□□ 0.47
PDLIM1-202ENST00000477757 PTGR2Q8N8N7 351 aaPredicted RBP18■□□□□ 0.47
PDLIM1-202ENST00000477757 KISS1RQ969F8 398 aaPredicted RBP18■□□□□ 0.47
PDLIM1-202ENST00000477757 HBEGFQ99075 208 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 USB1Q9BQ65 265 aaKnown RBP18■□□□□ 0.47
PDLIM1-202ENST00000477757 BRF2Q9HAW0 419 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 SENP1Q9P0U3 644 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 VDAC3Q9Y277 283 aa18■□□□□ 0.47
PDLIM1-202ENST00000477757 YLPM1P49750 1951 aaKnown RBP18■□□□□ 0.47
PDLIM1-202ENST00000477757 C7orf72A4D263 438 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 SHISA9B4DS77 424 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 RAMP1O60894 148 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 ESRRBO95718 433 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 PDYNP01213 254 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 C2P06681 752 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 IL3P08700 152 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 IGHV4-31P0DP07 118 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 IGFBP5P24593 272 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 CDH11P55287 796 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 IRX1P78414 480 aaPredicted RBP17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 C17orf67Q0P5P2 114 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 DECR1Q16698 335 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 CYB5R2Q6BCY4 276 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 KLC3Q6P597 504 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 ESPNLQ6ZVH7 1005 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 ARIH2OSQ8N7S6 290 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 BANPQ8N9N5 519 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 OR4F6Q8NGB9 312 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 RNF128Q8TEB7 428 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 EXOSC8Q96B26 276 aaKnown RBP17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 NSUN5Q96P11 429 aaKnown RBP17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 GPR78Q96P69 363 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 TBL1XR1Q9BZK7 514 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 GIMAP4Q9NUV9 329 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 SNX24Q9Y343 169 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 TENM1Q9UKZ4 2725 aa17.99■□□□□ 0.47
PDLIM1-202ENST00000477757 A0A087WZY1 265 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 TNFSF11O14788 317 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 GMFGO60234 142 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 LMX1BO60663 402 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 KLHL2O95198 593 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 IL33O95760 270 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 ANGPTL1O95841 491 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 C21orf58P58505 322 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 P2RY6Q15077 328 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 TECRLQ5HYJ1 363 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 AGAP6Q5VW22 663 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 GTF2IRD2BQ6EKJ0 949 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 C11orf71Q6IPW1 123 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 GTF2IRD2Q86UP8 949 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 CACNG6Q9BXT2 260 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 NMRK1Q9NWW6 199 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 MCM8Q9UJA3 840 aa17.98■□□□□ 0.47
PDLIM1-202ENST00000477757 PYGBP11216 843 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 TCP1P17987 556 aaKnown RBP17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 PSMA4P25789 261 aaKnown RBP17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 RAC1P63000 192 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 PRR5P85299 388 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 NAB1Q13506 487 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 HBMQ6B0K9 141 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 TDRPQ86YL5 185 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 ZNF525Q8N782 197 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 ABHD3Q8WU67 409 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 SELENOMQ8WWX9 145 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 NPAS1Q99742 590 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 SHCBP1LQ9BZQ2 653 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 MANSC1Q9H8J5 431 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 Q9N2J8 555 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 SLC35C2Q9NQQ7 365 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 KLHL13Q9P2N7 655 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 PLCE1Q9P212 2302 aa17.97■□□□□ 0.47
PDLIM1-202ENST00000477757 ALPK2Q86TB3 2170 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 A0A087WV62 115 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 A0A0J9YW62 118 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 STX16-NPEPL1H3BU86 382 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms