RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 HS6ST1O60243 411 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 PRAMEF2O60811 474 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 COQ9O75208 318 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 STX11O75558 287 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 GADD45GO95257 159 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 NADKO95544 446 aaPredicted RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ALPPP05187 535 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 CCDC159P0C7I6 412 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 CCKBRP32239 447 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 SEPHS1P49903 392 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 PRKAG1P54619 331 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 CDH15P55291 814 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 MC2RQ01718 297 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 SPIBQ01892 262 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 EBPQ15125 230 aaKnown RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 OR8D4Q8NGM9 314 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 WDR36Q8NI36 951 aaKnown RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 SPPL2AQ8TCT8 520 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 CTRCQ99895 268 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 PELOQ9BRX2 385 aaKnown RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 APMAPQ9HDC9 416 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 CABIN1Q9Y6J0 2220 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 NCKAP5O14513 1909 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 A0A0B4J2E0 115 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 A0A1B0GX12 115 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 TTC36A6NLP5 189 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 PRKNO60260 465 aaPredicted RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF354AO60765 605 aaPredicted RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 SEC14L2O76054 403 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 OR5F1O95221 314 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 WISP1O95388 367 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 IGFBP1P08833 259 aaPredicted RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 IL7RP16871 459 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF28P17035 718 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 KRT20P35900 424 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 MPLP40238 635 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ANXA11P50995 505 aaKnown RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 CTBP2P56545 445 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ESRRGP62508 458 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ELAVL1Q15717 326 aaKnown RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 AMZ1Q400G9 498 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 VWA2Q5GFL6 755 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF311Q5JNZ3 666 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 SLX4IPQ5VYV7 408 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ISLR2Q6UXK2 745 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 TTLL10Q6ZVT0 673 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 GALNT5Q7Z7M9 940 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 SLC2A12Q8TD20 617 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 TMIGD2Q96BF3 282 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 RMND5BQ96G75 393 aaPredicted RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 MAGED4Q96JG8 741 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF649Q9BS31 505 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ITPAQ9BY32 194 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF304Q9HCX3 659 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 FBXO8Q9NRD0 319 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 BCKDKO14874 412 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 RFPL3O75679 317 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 OR6B1O95007 311 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 IL33O95760 270 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 IGF2P01344 180 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 DBIP07108 87 aaKnown RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ALOX5P09917 674 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ZGLP1P0C6A0 271 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 MASP1P48740 699 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 MRPL2Q5T653 305 aaKnown RBP11.19□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF773Q6PK81 442 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 FAM198BQ6UWH4 519 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 TSPAN14Q8NG11 270 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 SPATA5L1Q9BVQ7 753 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 NUDT9Q9BW91 350 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 FAM192AQ9GZU8 254 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 RXFP3Q9NSD7 469 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 SCOCQ9UIL1 159 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 SPACA6W5XKT8 324 aa11.19□□□□□ -0.62
PRPF39-203ENST00000477626 CDC123O75794 336 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 FOXL2P58012 376 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 SNRPGP62308 76 aaKnown RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 SPARTQ8N0X7 666 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 OR13F1Q8NGS4 319 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 CNIH3Q8TBE1 160 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 PLA2G12AQ9BZM1 189 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 ADAP2Q9NPF8 381 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 J3QRE1 110 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 ETV2O00321 342 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 FRS3O43559 492 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 KLF7O75840 302 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 CCNB2O95067 398 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 H1F0P07305 194 aaKnown RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 NT5EP21589 574 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 PPICP45877 212 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 RPL5P46777 297 aaKnown RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 SKP2Q13309 424 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 PRICKLE2Q7Z3G6 844 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 PIP4P1Q86T03 277 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 BPHLQ86WA6 291 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 NKAIN4Q8IVV8 208 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 AKIRIN1Q9H9L7 192 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 EXOSC3Q9NQT5 275 aaKnown RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 SOHLH2Q9NX45 425 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 AASSQ9UDR5 926 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms