RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 UGT3A2Q3SY77 523 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 SOWAHCQ53LP3 525 aaPredicted RBP4.85□□□□□ -1.63
VPS45-207ENST00000477558 TOR1AIP1Q5JTV8 583 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 CEP85LQ5SZL2 805 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 MLIPQ5VWP3 458 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 HIST2H2AA3Q6FI13 130 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 ACSM6Q6P461 480 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 TRIM40Q6P9F5 258 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 IGFL2Q6UWQ7 119 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 C16orf89Q6UX73 402 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 ZNF66Q6ZN08 573 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 GPRIN3Q6ZVF9 776 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 C10orf107Q8IVU9 208 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 RNF175Q8N4F7 328 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 ACOT4Q8N9L9 421 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 SRFBP1Q8NEF9 429 aaKnown RBP4.85□□□□□ -1.63
VPS45-207ENST00000477558 TRPC4APQ8TEL6 797 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 APOBEC4Q8WW27 367 aaKnown RBP4.85□□□□□ -1.63
VPS45-207ENST00000477558 DDB2Q92466 427 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 TBC1D20Q96BZ9 403 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 CMTM7Q96FZ5 175 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 FCRL1Q96LA6 429 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 FAM111AQ96PZ2 611 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 F2RL3Q96RI0 385 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 SMC6Q96SB8 1091 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 CSF3RQ99062 836 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 MTERF1Q99551 399 aaKnown RBP4.85□□□□□ -1.63
VPS45-207ENST00000477558 GATA5Q9BWX5 397 aaPredicted RBP4.85□□□□□ -1.63
VPS45-207ENST00000477558 SEMA4CQ9C0C4 833 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 SLC7A5P2Q9GIP4 190 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 ROGDIQ9GZN7 287 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 VIPAS39Q9H9C1 493 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 TMBIM4Q9HC24 238 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 GAR1Q9NY12 217 aaKnown RBP4.85□□□□□ -1.63
VPS45-207ENST00000477558 HCN3Q9P1Z3 774 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 PTGFRNQ9P2B2 879 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 GRHPRQ9UBQ7 328 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 C3orf18Q9UK00 162 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 FBXL4Q9UKA2 621 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 MMACHCQ9Y4U1 282 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 ANGPTL3Q9Y5C1 460 aa4.85□□□□□ -1.63
VPS45-207ENST00000477558 LINC01548A6NM66 108 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 RTCAO00442 366 aaKnown RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 SYT5O00445 386 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 MANBAO00462 879 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 BIRC5O15392 142 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 RGS16O15492 202 aaPredicted RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 ALOX12BO75342 701 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 EEDO75530 441 aaKnown RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 OR4F21O95013 312 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 FGF4P08620 206 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 C8orf89P0DMQ9 161 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 TSPAN8P19075 237 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 ZNF10P21506 573 aaPredicted RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 JAK1P23458 1154 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 CCR10P46092 362 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 GPR143P51810 404 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 PLA2G16P53816 162 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 EMP2P54851 167 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 HNRNPH2P55795 449 aaKnown RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 HSD17B7P56937 341 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 OLR1P78380 273 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 BTN3A2P78410 334 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 TNFRSF17Q02223 184 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 BLMHQ13867 455 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 RUNX2Q13950 521 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 RCN2Q14257 317 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 KRT72Q14CN4 511 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 KIAA0040Q15053 153 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 DEFB109BQ30KR1 87 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 BTBD16Q32M84 506 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 XKR7Q5GH72 579 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 TCHHL1Q5QJ38 904 aaPredicted RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 OR4C11Q6IEV9 310 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 LIN54Q6MZP7 749 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 IGFL3Q6UXB1 125 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 SHISA6Q6ZSJ9 500 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 LANCL3Q6ZV70 420 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 NUDT13Q86X67 352 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 ZNF595Q8IYB9 648 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 METTL4Q8N3J2 472 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 GBP7Q8N8V2 638 aaPredicted RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 NFAM1Q8NET5 270 aaPredicted RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 PSMF1Q92530 271 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 TSLPQ969D9 159 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 ZNF764Q96H86 408 aaPredicted RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 METTL2AQ96IZ6 378 aaKnown RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 CNDP1Q96KN2 507 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 FYTTD1Q96QD9 318 aaKnown RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 SORT1Q99523 831 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 SERPINI1Q99574 410 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 MECRQ9BV79 373 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 ACPTQ9BZG2 426 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 ING2Q9H160 280 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 OR51B5Q9H339 312 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 TUBB1Q9H4B7 451 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 FARSBQ9NSD9 589 aaKnown RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 SNX6Q9UNH7 406 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 ASB4Q9Y574 426 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 RP1L1Q8IWN7 2480 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms