RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 CD55P08174 381 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 UQCRBP14927 111 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 H2AFXP16104 143 aaPredicted RBP2.37□□□□□ -2.03
TARDBP-208ENST00000477447 AZU1P20160 251 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 CCNA2P20248 432 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 ZP3P21754 424 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 PAICSP22234 425 aaKnown RBP2.37□□□□□ -2.03
TARDBP-208ENST00000477447 UGT1A3P35503 534 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 GNPDA1P46926 289 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 MTTPP55157 894 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 STX17P56962 302 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 RND3P61587 244 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 RPL32P62910 135 aaKnown RBP2.37□□□□□ -2.03
TARDBP-208ENST00000477447 IL1RL1Q01638 556 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 HSF2Q03933 536 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 CDKN3Q16667 212 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 ADPRMQ3LIE5 342 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 SBK1Q52WX2 424 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 OR8G2PQ6IF36 304 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 ZNF544Q6NX49 715 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 ZCCHC12Q6PEW1 402 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 HSD11B1LQ7Z5J1 315 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 SYVN1Q86TM6 617 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 CNNM3Q8NE01 707 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 STKLD1Q8NE28 680 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 OR2T33Q8NG76 320 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 GIPC3Q8TF64 312 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 SELENOMQ8WWX9 145 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 C18orf25Q96B23 403 aaPredicted RBP2.37□□□□□ -2.03
TARDBP-208ENST00000477447 MRPL38Q96DV4 380 aaKnown RBP2.37□□□□□ -2.03
TARDBP-208ENST00000477447 SLC25A38Q96DW6 304 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 FAM122AQ96E09 287 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 DHTKD1Q96HY7 919 aaPredicted RBP2.37□□□□□ -2.03
TARDBP-208ENST00000477447 HPDLQ96IR7 371 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 VSTM2LQ96N03 204 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 TMEM121Q9BTD3 319 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 TBCDQ9BTW9 1192 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 SLC25A51Q9H1U9 297 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 LPAR2Q9HBW0 351 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 POLD4Q9HCU8 107 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 TMEM9Q9P0T7 183 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 MGAT4BQ9UQ53 548 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 PDE10AQ9Y233 779 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 EIF3LQ9Y262 564 aaKnown RBP2.37□□□□□ -2.03
TARDBP-208ENST00000477447 L3MBTL1Q9Y468 752 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 METP08581 1390 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 CFAP65Q6ZU64 1925 aaKnown RBP2.36□□□□□ -2.03
TARDBP-208ENST00000477447 CCDC7Q96M83 1385 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 A0A0U1RQV5 110 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 FAM74A7A6NL05 159 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 WWP2O00308 870 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 VPS26AO75436 327 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 STX11O75558 287 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 AKR7A3O95154 331 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 LYPD3O95274 346 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 ANP32DO95626 131 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 APBB3O95704 486 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 HSPB1P04792 205 aaKnown RBP2.36□□□□□ -2.03
TARDBP-208ENST00000477447 BCKDHAP12694 445 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 XRCC1P18887 633 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-208ENST00000477447 DNAJB1P25685 340 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 CDH5P33151 784 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-208ENST00000477447 CYLC1P35663 651 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-208ENST00000477447 NOVA1P51513 510 aaKnown RBP2.36□□□□□ -2.03
TARDBP-208ENST00000477447 NAPAP54920 295 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 LIM2P55344 173 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 RPL8P62917 257 aaKnown RBP2.36□□□□□ -2.03
TARDBP-208ENST00000477447 BCL2L1Q07817 233 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 ZNF154Q13106 437 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 KCNJ11Q14654 390 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 FAM74A3Q4VXF1 159 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 WSCD1Q658N2 575 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 TMEM184AQ6ZMB5 413 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 STAC2Q6ZMT1 411 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 LRRC70Q7Z2Q7 622 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 ZSCAN4Q8NAM6 433 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-208ENST00000477447 OR2L5Q8NG80 312 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 SDSLQ96GA7 329 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 VPS39Q96JC1 886 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 NOL4LQ96MY1 436 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-208ENST00000477447 NMUR2Q9GZQ4 415 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 COMMD4Q9H0A8 199 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 POLR3FQ9H1D9 316 aaPredicted RBP2.36□□□□□ -2.03
TARDBP-208ENST00000477447 PDFQ9HBH1 243 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 PLSCR3Q9NRY6 295 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 RDH8Q9NYR8 311 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 CA5BQ9Y2D0 317 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 GMPPBQ9Y5P6 360 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 AP4B1Q9Y6B7 739 aa2.36□□□□□ -2.03
TARDBP-208ENST00000477447 DHRS7CA6NNS2 312 aa2.35□□□□□ -2.03
TARDBP-208ENST00000477447 OR7A17O14581 309 aa2.35□□□□□ -2.03
TARDBP-208ENST00000477447 LANCL1O43813 399 aa2.35□□□□□ -2.03
TARDBP-208ENST00000477447 TRIM3O75382 744 aaPredicted RBP2.35□□□□□ -2.03
TARDBP-208ENST00000477447 SCRG1O75711 98 aa2.35□□□□□ -2.03
TARDBP-208ENST00000477447 IGHV3-23P01764 117 aa2.35□□□□□ -2.03
TARDBP-208ENST00000477447 THRBP10828 461 aa2.35□□□□□ -2.03
TARDBP-208ENST00000477447 PSMB1P20618 241 aaKnown RBP2.35□□□□□ -2.03
TARDBP-208ENST00000477447 PTGFRP43088 359 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms