RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SNX8Q9Y5X2 465 aa10.12□□□□□ -0.79
BRCA1-213ENST00000476777 ELOA3DA6NLF2 546 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-213ENST00000476777 SHISA9B4DS77 424 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 CXCL13O43927 109 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 RAMP1O60894 148 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 NTN1O95631 604 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 FESP07332 822 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 TUBBP07437 444 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 NUDT6P53370 316 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 RUNX1T1Q06455 604 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 FAM83EQ2M2I3 478 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 ELOA3BQ3SY89 546 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 CYP27C1Q4G0S4 372 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 SFRP5Q5T4F7 317 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 CYB5R2Q6BCY4 276 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 TFAP2EQ6VUC0 442 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 GALNT10Q86SR1 603 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 ELOA3Q8NG57 546 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 MTBPQ96DY7 904 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 NSUN5Q96P11 429 aaKnown RBP10.11□□□□□ -0.79
BRCA1-213ENST00000476777 GPR78Q96P69 363 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 HBEGFQ99075 208 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 HEATR1Q9H583 2144 aaKnown RBP10.11□□□□□ -0.79
BRCA1-213ENST00000476777 ELOVL6Q9H5J4 265 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 PFDN4Q9NQP4 134 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 FBXO34Q9NWN3 711 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 TAS2R9Q9NYW1 312 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 CISD1Q9NZ45 108 aaKnown RBP10.11□□□□□ -0.79
BRCA1-213ENST00000476777 CPSF2Q9P2I0 782 aaKnown RBP10.11□□□□□ -0.79
BRCA1-213ENST00000476777 STOML1Q9UBI4 398 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 SNX24Q9Y343 169 aa10.11□□□□□ -0.79
BRCA1-213ENST00000476777 DYSFO75923 2080 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 GMFGO60234 142 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 SYNGR4O95473 234 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 PDYNP01213 254 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 OPN1LWP04000 364 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 C2P06681 752 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 IGHV4-31P0DP07 118 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 ZNF17P17021 662 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 SRD5A1P18405 259 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 PTNP21246 168 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 IL32P24001 234 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 C21orf58P58505 322 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 DSCR9P59020 149 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 IRX1P78414 480 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-213ENST00000476777 ZNF155Q12901 538 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-213ENST00000476777 GGTA1PQ4G0N0 100 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 SH2D4BQ5SQS7 431 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 FAM219BQ5XKK7 198 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 CLEC2AQ6UVW9 174 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 APOOLQ6UXV4 268 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 WDR75Q8IWA0 830 aaKnown RBP10.1□□□□□ -0.79
BRCA1-213ENST00000476777 C1orf52Q8N6N3 182 aaKnown RBP10.1□□□□□ -0.79
BRCA1-213ENST00000476777 PPM1NQ8N819 430 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 PTGR2Q8N8N7 351 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-213ENST00000476777 EXOSC8Q96B26 276 aaKnown RBP10.1□□□□□ -0.79
BRCA1-213ENST00000476777 NPAS1Q99742 590 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 BRF2Q9HAW0 419 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 FAIMQ9NVQ4 179 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 PCTPQ9UKL6 214 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 VDAC3Q9Y277 283 aa10.1□□□□□ -0.79
BRCA1-213ENST00000476777 ARFGEF3Q5TH69 2177 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 A0A0J9YW62 118 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 HMX2A2RU54 273 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 UBFD1O14562 309 aaKnown RBP10.09□□□□□ -0.79
BRCA1-213ENST00000476777 TNFSF11O14788 317 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 DLX3O60479 287 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 LMX1BO60663 402 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 KLHL2O95198 593 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 ESRRBO95718 433 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 IL33O95760 270 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 ANGPTL1O95841 491 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 IL3P08700 152 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 GSTA2P09210 222 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 SLC25A16P16260 332 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 ZNF16P17020 682 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-213ENST00000476777 IGFBP5P24593 272 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 PSMA4P25789 261 aaKnown RBP10.09□□□□□ -0.79
BRCA1-213ENST00000476777 CLK3P49761 638 aaKnown RBP10.09□□□□□ -0.79
BRCA1-213ENST00000476777 CDH11P55287 796 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 RAC1P63000 192 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 PRR5P85299 388 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 C17orf67Q0P5P2 114 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 DECR1Q16698 335 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 AGAP6Q5VW22 663 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 GTF2IRD2BQ6EKJ0 949 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 ESPNLQ6ZVH7 1005 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 NUFIP2Q7Z417 695 aaKnown RBP10.09□□□□□ -0.79
BRCA1-213ENST00000476777 CCDC91Q7Z6B0 441 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 GTF2IRD2Q86UP8 949 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 SAMD14Q8IZD0 417 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-213ENST00000476777 GTPBP8Q8N3Z3 284 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-213ENST00000476777 OR4F6Q8NGB9 312 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 OR2V1Q8NHB1 315 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 ABHD3Q8WU67 409 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 KISS1RQ969F8 398 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-213ENST00000476777 PHF21BQ96EK2 531 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 ADAD1Q96M93 576 aaKnown RBP10.09□□□□□ -0.79
BRCA1-213ENST00000476777 CACNG6Q9BXT2 260 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 POTEKPQ9BYX7 375 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms