RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TNFRSF21O75509 655 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 TNFSF13O75888 250 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 SLU7O95391 586 aaKnown RBP9.75□□□□□ -0.85
SEC13-214ENST00000476597 CRHP06850 196 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 NGFRP08138 427 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 FREM3P0C091 2139 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 ACP2P11117 423 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 TCEA1P23193 301 aaKnown RBP9.75□□□□□ -0.85
SEC13-214ENST00000476597 MAPK1P28482 360 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 SUCLG1P53597 346 aaKnown RBP9.75□□□□□ -0.85
SEC13-214ENST00000476597 EEFSECP57772 596 aaKnown RBP9.75□□□□□ -0.85
SEC13-214ENST00000476597 STX5Q13190 355 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 TMEM44Q2T9K0 475 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 GRAMD1BQ3KR37 738 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 C6orf136Q5SQH8 315 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 GRAMD2AQ8IUY3 354 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 MEIOBQ8N635 442 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 OR4C3Q8NH37 302 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 LINC01560Q8TB33 94 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 SLC9A6Q92581 669 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 FAM120BQ96EK7 910 aaKnown RBP9.75□□□□□ -0.85
SEC13-214ENST00000476597 C1GALT1C1Q96EU7 318 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 RMND5BQ96G75 393 aaPredicted RBP9.75□□□□□ -0.85
SEC13-214ENST00000476597 C3orf30Q96M34 536 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 GPATCH1Q9BRR8 931 aaKnown RBP9.75□□□□□ -0.85
SEC13-214ENST00000476597 RBM24Q9BX46 236 aaKnown RBP9.75□□□□□ -0.85
SEC13-214ENST00000476597 TBL1XR1Q9BZK7 514 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 CLEC4MQ9H2X3 399 aaPredicted RBP9.75□□□□□ -0.85
SEC13-214ENST00000476597 PIGMQ9H3S5 423 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 LIME1Q9H400 295 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 GIMAP2Q9UG22 337 aa9.75□□□□□ -0.85
SEC13-214ENST00000476597 NIPBLQ6KC79 2804 aaeCLIP9.75□□□□□ -0.85
SEC13-214ENST00000476597 A0A1W2PNV4 684 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 A0A1W2PRB8 838 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 A8MXE2 369 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 H0YC42 278 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 SCAMP2O15127 329 aaKnown RBP9.74□□□□□ -0.85
SEC13-214ENST00000476597 LYPLA1O75608 230 aaPredicted RBP9.74□□□□□ -0.85
SEC13-214ENST00000476597 KCNK2O95069 426 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 LAMP1P11279 417 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 DDX5P17844 614 aaKnown RBP9.74□□□□□ -0.85
SEC13-214ENST00000476597 TBXA2RP21731 343 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 LCN1P31025 176 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 RPL3P39023 403 aaKnown RBP9.74□□□□□ -0.85
SEC13-214ENST00000476597 IST1P53990 364 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 DIO3P55073 304 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 TPD52P55327 224 aaPredicted RBP9.74□□□□□ -0.85
SEC13-214ENST00000476597 OCRLQ01968 901 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 DUSP5Q16690 384 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.74□□□□□ -0.85
SEC13-214ENST00000476597 ATP6AP1LQ52LC2 224 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 IL23RQ5VWK5 629 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 RAET1LQ5VY80 246 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 OR2A2Q6IF42 318 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 MFSD12Q6NUT3 480 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 CHMP1BQ7LBR1 199 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 LUZP2Q86TE4 346 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 CDC20BQ86Y33 519 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 UBQLNLQ8IYU4 475 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 GCNT2Q8N0V5 402 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 MREGQ8N565 214 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 NATD1Q8N6N6 113 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 OR7A2PQ8NGA2 310 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 OR5M1Q8NGP8 315 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 PSMA8Q8TAA3 256 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 AGR3Q8TD06 166 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 FIG4Q92562 907 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 NINJ1Q92982 152 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 COQ8BQ96D53 544 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 STARD4Q96DR4 205 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 MS4A4EQ96PG1 132 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 PIGQQ9BRB3 760 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 HHATLQ9HCP6 504 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 SIRT3Q9NTG7 399 aaPredicted RBP9.74□□□□□ -0.85
SEC13-214ENST00000476597 FBXO34Q9NWN3 711 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 AP4B1Q9Y6B7 739 aa9.74□□□□□ -0.85
SEC13-214ENST00000476597 ZNF469Q96JG9 3925 aaPredicted RBP9.74□□□□□ -0.85
SEC13-214ENST00000476597 SLC22A20A6NK97 555 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 MSTNO14793 375 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 CTIFO43310 598 aaKnown RBP9.73□□□□□ -0.85
SEC13-214ENST00000476597 NDUFB5O43674 189 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 OXSR1O95747 527 aaPredicted RBP9.73□□□□□ -0.85
SEC13-214ENST00000476597 HMGN2P05204 90 aaKnown RBP9.73□□□□□ -0.85
SEC13-214ENST00000476597 ALOX5P09917 674 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 CD1EP15812 388 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 EFNA1P20827 205 aaPredicted RBP9.73□□□□□ -0.85
SEC13-214ENST00000476597 HPCAL1P37235 193 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 SERPINB4P48594 390 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 PCYT1AP49585 367 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 PRIM2P49643 509 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 ART1P52961 327 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 CLDN20P56880 219 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 PTGR1Q14914 329 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 CPTPQ5TA50 214 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 FIGNL1Q6PIW4 674 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 P4HA3Q7Z4N8 544 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 ZAR1Q86SH2 424 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 GALNT10Q86SR1 603 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 NUDCD3Q8IVD9 361 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 RIMKLAQ8IXN7 391 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms