RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 UBTD1Q9HAC8 227 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 Q9N2J8 555 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 MID1IP1Q9NPA3 183 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 PLSCR4Q9NRQ2 329 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 DDX18Q9NVP1 670 aaKnown RBP11.77□□□□□ -0.53
MRPL55-228ENST00000476267 POLR3HQ9Y535 204 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-228ENST00000476267 FN1P02751 2386 aaKnown RBP11.76□□□□□ -0.53
MRPL55-228ENST00000476267 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 GXYLT2A0PJZ3 443 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 CCDC151A5D8V7 595 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 GOLGA8RI6L899 631 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 KLF4O43474 513 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-228ENST00000476267 UTS2O95399 124 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 NID1P14543 1247 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 ZNF17P17021 662 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 IL11P20809 199 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 PRPH2P23942 346 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 NTSP30990 170 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 FRKP42685 505 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-228ENST00000476267 SLC6A8P48029 635 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 C17orf67Q0P5P2 114 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 GRAMD1BQ3KR37 738 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 SPDYAQ5MJ70 313 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 EXOSC6Q5RKV6 272 aaKnown RBP11.76□□□□□ -0.53
MRPL55-228ENST00000476267 NOXRED1Q6NXP6 359 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 FRMD7Q6ZUT3 714 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 YTHDF3Q7Z739 585 aaKnown RBP11.76□□□□□ -0.53
MRPL55-228ENST00000476267 P3H2Q8IVL5 708 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 CDC26Q8NHZ8 85 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 PIK3R3Q92569 461 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 GIMAP5Q96F15 307 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 ZNF764Q96H86 408 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-228ENST00000476267 FCRL1Q96LA6 429 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 GSX2Q9BZM3 304 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 MIEF1Q9NQG6 463 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 NTMQ9P121 344 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 PROCRQ9UNN8 238 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 CUBNO60494 3623 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 ZANQ9Y493 2812 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 ABCA2Q9BZC7 2435 aa11.76□□□□□ -0.53
MRPL55-228ENST00000476267 C7orf72A4D263 438 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 TRIM64A6NGJ6 449 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 TRIM64BA6NI03 449 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 TTC36A6NLP5 189 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 ALG1L2C9J202 215 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 NKX2-2O95096 273 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 PROCP04070 461 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 NGFRP08138 427 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 PYGBP11216 843 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 FCGR2AP12318 317 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 TBXA2RP21731 343 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 PSMD4P55036 377 aaKnown RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 RPS3AP61247 264 aaKnown RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 ZNHIT3Q15649 155 aaPredicted RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 ZNF385BQ569K4 471 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 ZYG11AQ6WRX3 759 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 STAC2Q6ZMT1 411 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 TRMT10CQ7L0Y3 403 aaKnown RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 ZNF551Q7Z340 670 aaPredicted RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 GTPBP8Q8N3Z3 284 aaPredicted RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 OR6K3Q8NGY3 331 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 FAM110BQ8TC76 370 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 GFM2Q969S9 779 aaKnown RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 PERPQ96FX8 193 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 ZC3HAV1LQ96H79 300 aaKnown RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 METTL2AQ96IZ6 378 aaKnown RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 KLHDC3Q9BQ90 382 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 TMEM204Q9BSN7 226 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 PSMC3IPQ9P2W1 217 aaPredicted RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 MRTO4Q9UKD2 239 aaKnown RBP11.75□□□□□ -0.53
MRPL55-228ENST00000476267 HEATR5AQ86XA9 2040 aa11.75□□□□□ -0.53
MRPL55-228ENST00000476267 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.74□□□□□ -0.53
MRPL55-228ENST00000476267 A0A1W2PPM1 405 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 H3BQF6 201 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 ADAMDEC1O15204 470 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 TBX19O60806 448 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 OXSR1O95747 527 aaPredicted RBP11.74□□□□□ -0.53
MRPL55-228ENST00000476267 GABRA3P34903 492 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 KCNJ5P48544 419 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 PTH2RP49190 550 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 CLK3P49761 638 aaKnown RBP11.74□□□□□ -0.53
MRPL55-228ENST00000476267 NAA20P61599 178 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 CAPRIN1Q14444 709 aaKnown RBP11.74□□□□□ -0.53
MRPL55-228ENST00000476267 SLC29A2Q14542 456 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 PLPPR5Q32ZL2 321 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 ANKRD34AQ69YU3 496 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 RNF165Q6ZSG1 346 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 ZAR1Q86SH2 424 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 EXOC3L1Q86VI1 746 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 CCNYL1Q8N7R7 359 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 OR4C3Q8NH37 302 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 OR10D3Q8NH80 312 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 POC1BQ8TC44 478 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 CCDC126Q96EE4 140 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 GMPPAQ96IJ6 420 aaPredicted RBP11.74□□□□□ -0.53
MRPL55-228ENST00000476267 BDH2Q9BUT1 245 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 TBL1XR1Q9BZK7 514 aa11.74□□□□□ -0.53
MRPL55-228ENST00000476267 ZNF701Q9NV72 531 aaPredicted RBP11.74□□□□□ -0.53
MRPL55-228ENST00000476267 DCDC2Q9UHG0 476 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms