RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 SEC14L4Q9UDX3 406 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 STUB1Q9UNE7 303 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 SSR3Q9UNL2 185 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 KNL1Q8NG31 2342 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 KIR2DS5A0A0G2JLQ3 304 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 A0A0G2JNG1 304 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 GXYLT2A0PJZ3 443 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 KIR2DS3K7RE56 304 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 TAF4O00268 1085 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 LRRTM2O43300 516 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 GALR3O60755 368 aaPredicted RBP8.32□□□□□ -1.08
CCDC66-216ENST00000476142 OR5F1O95221 314 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 SLC2A10O95528 541 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 DLGAP3O95886 979 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 CT62P0C5K7 136 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 ST6GAL1P15907 406 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 FUT1P19526 365 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 IGFBP4P22692 258 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 FPR3P25089 353 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 SOX18P35713 384 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 ATP6V1E1P36543 226 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 RPS19P39019 145 aaKnown RBP8.32□□□□□ -1.08
CCDC66-216ENST00000476142 CDH11P55287 796 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 MLLT11Q13015 90 aaPredicted RBP8.32□□□□□ -1.08
CCDC66-216ENST00000476142 FZD2Q14332 565 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 KIR2DS5Q14953 304 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 MRPL2Q5T653 305 aaKnown RBP8.32□□□□□ -1.08
CCDC66-216ENST00000476142 C19orf48Q6RUI8 117 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 SMARCD3Q6STE5 483 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 MBOAT2Q6ZWT7 520 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 RNF44Q7L0R7 432 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 LHFPL3Q86UP9 236 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 PHC2Q8IXK0 858 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 ZFP41Q8N8Y5 198 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 ZDHHC1Q8WTX9 485 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 NACC2Q96BF6 587 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 SAMD8Q96LT4 415 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 DPH1Q9BZG8 443 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 TPSD1Q9BZJ3 242 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 NXF2Q9GZY0 626 aaKnown RBP8.32□□□□□ -1.08
CCDC66-216ENST00000476142 RACGAP1Q9H0H5 632 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 NDUFB11Q9NX14 153 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 QPCTLQ9NXS2 382 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 HCN3Q9P1Z3 774 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 TESQ9UGI8 421 aaKnown RBP8.32□□□□□ -1.08
CCDC66-216ENST00000476142 YARS2Q9Y2Z4 477 aaKnown RBP8.32□□□□□ -1.08
CCDC66-216ENST00000476142 CSNK1G3Q9Y6M4 447 aa8.32□□□□□ -1.08
CCDC66-216ENST00000476142 SCN2AQ99250 2005 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 SPTY2D1-AS1A0A0U1RR47 76 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.31□□□□□ -1.08
CCDC66-216ENST00000476142 SMIM30A4D0T7 59 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 OR5K3A6NET4 321 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 CYR61O00622 381 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 CDC42EP2O14613 210 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 ATP1B1P05026 303 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 TGM1P22735 817 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 STAT5AP42229 794 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 CRYBB2P43320 205 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 LIMK1P53667 647 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 EEF1A1P68104 462 aaKnown RBP8.31□□□□□ -1.08
CCDC66-216ENST00000476142 DUSP8Q13202 625 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 FHL5Q5TD97 284 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 STEAP3Q658P3 488 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 C22orf42Q6IC83 251 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 TUBA3EQ6PEY2 450 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 LYSMD2Q8IV50 215 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 CDRT4Q8N9R6 151 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 BBS1Q8NFJ9 593 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 OR4F15Q8NGB8 312 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 PFN4Q8NHR9 129 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 GRHL3Q8TE85 626 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 NELL2Q99435 816 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 ZNF350Q9GZX5 532 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 ANKRD19PQ9H560 264 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 ZNF576Q9H609 170 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 KRCC1Q9NPI7 259 aaPredicted RBP8.31□□□□□ -1.08
CCDC66-216ENST00000476142 MAT2BQ9NZL9 334 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 USP36Q9P275 1121 aaKnown RBP8.31□□□□□ -1.08
CCDC66-216ENST00000476142 ARHGEF17Q96PE2 2063 aaPredicted RBP8.31□□□□□ -1.08
CCDC66-216ENST00000476142 A0A0A6YYC8 382 aaPredicted RBP8.31□□□□□ -1.08
CCDC66-216ENST00000476142 SAGE2PA6NJ88 616 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 FAM183AA6NL82 134 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 I3L1I5 382 aaPredicted RBP8.31□□□□□ -1.08
CCDC66-216ENST00000476142 CDRT1O95170 752 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 DBIP07108 87 aaKnown RBP8.31□□□□□ -1.08
CCDC66-216ENST00000476142 HTR2AP28223 471 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 GCGRP47871 477 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 ZNF136P52737 540 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 MAZP56270 477 aaKnown RBP8.31□□□□□ -1.08
CCDC66-216ENST00000476142 WNT4P56705 351 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 EFNB1P98172 346 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 ZNF45Q02386 682 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 PRKCDQ05655 676 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 DBPQ10586 325 aaPredicted RBP8.31□□□□□ -1.08
CCDC66-216ENST00000476142 RAB40BQ12829 278 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 PRICKLE4Q2TBC4 344 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 PGGHGQ32M88 737 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 MINDY4Q4G0A6 757 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 C3orf38Q5JPI3 329 aa8.31□□□□□ -1.08
CCDC66-216ENST00000476142 SLC25A30Q5SVS4 291 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms