RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 BTBD9Q96Q07 612 aa12.84□□□□□ -0.35
CSNK2B-207ENST00000475875 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
CSNK2B-207ENST00000475875 C12orf49Q9H741 205 aa12.84□□□□□ -0.35
CSNK2B-207ENST00000475875 FOLH1BQ9HBA9 442 aa12.84□□□□□ -0.35
CSNK2B-207ENST00000475875 MYOZ1Q9NP98 299 aaPredicted RBP12.84□□□□□ -0.35
CSNK2B-207ENST00000475875 SDHAF3Q9NRP4 125 aa12.84□□□□□ -0.35
CSNK2B-207ENST00000475875 MAT2BQ9NZL9 334 aa12.84□□□□□ -0.35
CSNK2B-207ENST00000475875 TXNDC16Q9P2K2 825 aa12.84□□□□□ -0.35
CSNK2B-207ENST00000475875 IGHV4-61A0A0C4DH41 118 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 E7EQL1 145 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 SMAD9O15198 467 aaKnown RBP12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 TMPRSS2O15393 492 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 SYNGR4O95473 234 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 CBX7O95931 251 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 ATP1B1P05026 303 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 PABPC4LP0CB38 370 aaKnown RBP12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 IL12BP29460 328 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 STX2P32856 288 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 GPX6P59796 221 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 CUL3Q13618 768 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 PPA1Q15181 289 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 Q6ZSR9 355 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 NUDT13Q86X67 352 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 PDPRQ8NCN5 879 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 OR10D3Q8NH80 312 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 FBF1Q8TES7 1133 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 HTRA1Q92743 480 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 C1GALT1C1Q96EU7 318 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 RBM4Q9BWF3 364 aaKnown RBP12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 BRINP2Q9C0B6 783 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 DERL2Q9GZP9 239 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 CDC42EP4Q9H3Q1 356 aaKnown RBP12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 NSMCE4AQ9NXX6 385 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 NINJ2Q9NZG7 142 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 ARMCX1Q9P291 453 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 PLLPQ9Y342 182 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 FKBP7Q9Y680 259 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 PMF1-BGLAPU3KQ54 211 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 NBEAL2Q6ZNJ1 2754 aa12.83□□□□□ -0.36
CSNK2B-207ENST00000475875 VWFP04275 2813 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 LOC390937A0A1W2PQ73 354 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 GOLGA6L10A6NI86 522 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 EIF1AYO14602 144 aaKnown RBP12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 EVI2BP34910 448 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 EMDP50402 254 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 PHEXP78562 749 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 CHRNB3Q05901 458 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 EXOSC7Q15024 291 aaKnown RBP12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 TSC22D1Q15714 1073 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 TMEM44Q2T9K0 475 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 MIDNQ504T8 468 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 GRHL2Q6ISB3 625 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 MFSD12Q6NUT3 480 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 TRMT10BQ6PF06 316 aaKnown RBP12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 FAM111BQ6SJ93 734 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 SHISA2Q6UWI4 295 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 LARP4Q71RC2 724 aaKnown RBP eCLIP12.82□□□□□ -0.361e-7■■□□□ 12.5
CSNK2B-207ENST00000475875 P2RY8Q86VZ1 359 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 CTAGE3PQ8IX95 158 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 GSPT2Q8IYD1 628 aaKnown RBP12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 OR52R1Q8NGF1 315 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 ZNF418Q8TF45 676 aaPredicted RBP12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 ANKRD49Q8WVL7 239 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 ESAMQ96AP7 390 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 MUCL1Q96DR8 90 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 ADGRG7Q96K78 797 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 POPDC3Q9HBV1 291 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 GP6Q9HCN6 339 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 SMYD2Q9NRG4 433 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 RAB21Q9UL25 225 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 ABCG2Q9UNQ0 655 aa12.82□□□□□ -0.36
CSNK2B-207ENST00000475875 KMT2CQ8NEZ4 4911 aaKnown RBP12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 A0A087WUV0 522 aaPredicted RBP12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 TCRBV9S1A1TA0A576 114 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 TRIM77I1YAP6 450 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 ADAMDEC1O15204 470 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 CCNT2O60583 730 aaKnown RBP12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 ERLIN1O75477 346 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 BCAS2O75934 225 aaPredicted RBP12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 DHRS4L1P0CG22 281 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 ZNF17P17021 662 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 LIMS1P48059 325 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 FABP6P51161 128 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 DDX39BQ13838 428 aaKnown RBP12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 TMEM201Q5SNT2 666 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 TIMM23BQ5SRD1 257 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 EMBQ6PCB8 327 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 TMEM108Q6UXF1 575 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 USP43Q70EL4 1123 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 BHLHA15Q7RTS1 189 aaPredicted RBP12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 GALNT10Q86SR1 603 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 WDR75Q8IWA0 830 aaKnown RBP12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 OR5M1Q8NGP8 315 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 KCTD4Q8WVF5 259 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 UBLCP1Q8WVY7 318 aaPredicted RBP12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 HPS1Q92902 700 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 ZNF747Q9BV97 191 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 CD244Q9BZW8 370 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 PLAC1Q9HBJ0 212 aa12.81□□□□□ -0.36
CSNK2B-207ENST00000475875 POU2F3Q9UKI9 436 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms