RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 IL12BP29460 328 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 OR1E2P47887 323 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 SPIBQ01892 262 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 RTP5Q14D33 572 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 EBPQ15125 230 aaKnown RBP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 EXT1Q16394 746 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 LCN10Q6JVE6 187 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 PPP4R4Q6NUP7 873 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 SHQ1Q6PI26 577 aaKnown RBP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF517Q6ZMY9 492 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 STK32CQ86UX6 486 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 RANBP3LQ86VV4 465 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 NLGN4XQ8N0W4 816 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 TAGAPQ8N103 731 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 GALNT4Q8N4A0 578 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 CBR4Q8N4T8 237 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 PIK3C3Q8NEB9 887 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 NLGN4YQ8NFZ3 816 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 VANGL1Q8TAA9 524 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 FAM110BQ8TC76 370 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 PMEPA1Q969W9 287 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 TP53INP1Q96A56 240 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 EPYCQ99645 322 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 RBM4BQ9BQ04 359 aaKnown RBP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 RBM4Q9BWF3 364 aaKnown RBP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 GPR87Q9BY21 358 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 WWTR1Q9GZV5 400 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 COQ10BQ9H8M1 238 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 NDUFAF4Q9P032 175 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 KIF17Q9P2E2 1029 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 TMCC3Q9ULS5 477 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 ABCG2Q9UNQ0 655 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 FARSAQ9Y285 508 aaKnown RBP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 C15orf41Q9Y2V0 281 aa11.32□□□□□ -0.6
MRPL55-227ENST00000475832 SAMHD1Q9Y3Z3 626 aaKnown RBP11.32□□□□□ -0.6
MRPL55-227ENST00000475832 C21orf140B9A014 251 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 C9orf172C9J069 976 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 H3BNH8 94 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 STMND1H3BQB6 276 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 TNFRSF11BO00300 401 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 UGT2B17O75795 530 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 ZFAND5O76080 213 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 SEC24DO94855 1032 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-227ENST00000475832 IL33O95760 270 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 HPRP00739 348 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 CLPSP04118 112 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 CT45A8P0DMV1 189 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 CT45A9P0DMV2 189 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 NID1P14543 1247 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 CDH2P19022 906 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-227ENST00000475832 TNFRSF1BP20333 461 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 ENDOUP21128 410 aaKnown RBP11.31□□□□□ -0.6
MRPL55-227ENST00000475832 RRM2P31350 389 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 ATP12AP54707 1039 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 RGS8P57771 180 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-227ENST00000475832 EPS8Q12929 822 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 NNATQ16517 81 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 CT45A2Q5DJT8 189 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 RNF220Q5VTB9 566 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 AP1ARQ63HQ0 302 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 NPSR1Q6W5P4 371 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 DEF8Q6ZN54 512 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 VRK2Q86Y07 508 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 CMIPQ8IY22 773 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 SLC34A3Q8N130 599 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF614Q8N883 585 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 BCORP1Q8N888 145 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 GPR32P1Q8NGA4 272 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 OR8K3Q8NH51 312 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 PHF10Q8WUB8 498 aaKnown RBP11.31□□□□□ -0.6
MRPL55-227ENST00000475832 CT55Q8WUE5 264 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 NACC2Q96BF6 587 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 FNDC11Q9BVV2 318 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 SEMA4CQ9C0C4 833 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 POLR2J2Q9GZM3 115 aaKnown RBP11.31□□□□□ -0.6
MRPL55-227ENST00000475832 POLR2J3Q9H1A7 115 aaKnown RBP11.31□□□□□ -0.6
MRPL55-227ENST00000475832 POLR1BQ9H9Y6 1135 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 RYDENQ9NUL5 291 aaKnown RBP11.31□□□□□ -0.6
MRPL55-227ENST00000475832 PPIEQ9UNP9 301 aaKnown RBP11.31□□□□□ -0.6
MRPL55-227ENST00000475832 TESMINQ9Y4I5 508 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 LRRC42Q9Y546 428 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 PCDHGA10Q9Y5H3 936 aa11.31□□□□□ -0.6
MRPL55-227ENST00000475832 LOC102723996A0A087X1L8 192 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 IGHV3-20A0A0C4DH32 117 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 TRBV11-1A0A0K0K1C0 115 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 A0A1W2PNU3 283 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-227ENST00000475832 SCDO00767 359 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 TO15178 435 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 ATXN7O15265 892 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-227ENST00000475832 RAD1O60671 282 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 CNOT3O75175 753 aaKnown RBP11.3□□□□□ -0.6
MRPL55-227ENST00000475832 REM1O75628 298 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 GADD45GO95257 159 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 ICAM2P13598 275 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 MMP11P24347 488 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 DCTP40126 519 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
MRPL55-227ENST00000475832 ALDH3A2P51648 485 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 NR0B1P51843 470 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms