RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 NME5P56597 212 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 WNT3P56703 355 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.81■■□□□ 1.08
CPNE1-223ENST00000475146 RIPPLY2Q5TAB7 128 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 BHLHB9Q6PI77 547 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 HDXQ7Z353 690 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 SPATA19Q7Z5L4 167 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 ZAR1Q86SH2 424 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 OR8J2Q8NGG1 315 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 OR4A15Q8NGL6 344 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 FAM110BQ8TC76 370 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 ADAMTS15Q8TE58 950 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 DUSP19Q8WTR2 217 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 TESCQ96BS2 214 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 TRIB1Q96RU8 372 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 G6PC3Q9BUM1 346 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 RUBCNLQ9H714 662 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 PTGES2Q9H7Z7 377 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 AIG1Q9NVV5 245 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 GPATCH2Q9NW75 528 aa21.81■■□□□ 1.08
CPNE1-223ENST00000475146 H0Y3Z8 333 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 ANKRD28O15084 1053 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 GMFGO60234 142 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 OXSR1O95747 527 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-223ENST00000475146 ALDOCP09972 364 aaKnown RBP21.8■■□□□ 1.08
CPNE1-223ENST00000475146 HPGDP15428 266 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 HK1P19367 917 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 ATP6V1C1P21283 382 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 GFRA1P56159 465 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 SRYQ05066 204 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 C17orf67Q0P5P2 114 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 RCAN2Q14206 197 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 TTMPQ5BVD1 217 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 NXNQ6DKJ4 435 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 APOOLQ6UXV4 268 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 SEM1Q6ZVN7 128 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 ANKRD46Q86W74 232 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 LACC1Q8IV20 430 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 GATSQ8NAP1 163 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 OR4C3Q8NH37 302 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 ZNF75CPQ92670 426 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-223ENST00000475146 KCNJ16Q9NPI9 418 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 FBXO34Q9NWN3 711 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 MRPS18CQ9Y3D5 142 aaKnown RBP21.8■■□□□ 1.08
CPNE1-223ENST00000475146 MED12Q93074 2177 aa21.8■■□□□ 1.08
CPNE1-223ENST00000475146 RNF103-CHMP3A0A140T963 221 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 KDM4EB2RXH2 506 aaPredicted RBP21.79■■□□□ 1.08
CPNE1-223ENST00000475146 E9PBE3 544 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 KLF11O14901 512 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 ZIC3O60481 467 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 EPPINO95925 133 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 LCN1P31025 176 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 STARP49675 285 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 GANABQ14697 944 aaKnown RBP21.79■■□□□ 1.08
CPNE1-223ENST00000475146 DPY19L1Q2PZI1 675 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 SPANXN4Q5MJ08 99 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 ANXA8L1Q5VT79 327 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 RAET1LQ5VY80 246 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 CLEC4FQ8N1N0 589 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 VPS37AQ8NEZ2 397 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 GIN1Q9NXP7 522 aa21.79■■□□□ 1.08
CPNE1-223ENST00000475146 NUP214P35658 2090 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-223ENST00000475146 ALG1L2C9J202 215 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 SCDO00767 359 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 NDUFB5O43674 189 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 CPSF4O95639 269 aaKnown RBP21.78■■□□□ 1.08
CPNE1-223ENST00000475146 NGFRP08138 427 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 CPN1P15169 458 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 H2AFXP16104 143 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-223ENST00000475146 TBXA2RP21731 343 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 S100A3P33764 101 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 UFM1P61960 85 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 RPS26P62854 115 aaKnown RBP21.78■■□□□ 1.08
CPNE1-223ENST00000475146 FAM174BQ3ZCQ3 159 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 NSUN5P2Q63ZY6 315 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 PIWIL2Q8TC59 973 aaKnown RBP21.78■■□□□ 1.08
CPNE1-223ENST00000475146 OR7D2Q96RA2 312 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 UBQLN4Q9NRR5 601 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 UNC79Q9P2D8 2635 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 ARHGAP21Q5T5U3 1957 aa21.78■■□□□ 1.08
CPNE1-223ENST00000475146 CACNA1DQ01668 2161 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 PRSS51A0A1B0GVH4 220 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 HSPB2A8KAH6 182 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 C9JVG2 144 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 TOXO94900 526 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 CHMP24386 653 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 PHC1P78364 1004 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 HSPB2Q16082 182 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 DCST2Q5T1A1 773 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 C6orf120Q7Z4R8 191 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 MCEMP1Q8IX19 187 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 TNIP2Q8NFZ5 429 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 OR5D16Q8NGK9 328 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 LRRC8CQ8TDW0 803 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 C1GALT1C1Q96EU7 318 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 SLC35G5Q96KT7 338 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 TEX37Q96LM6 180 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 ZBTB18Q99592 522 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 TUBA1CQ9BQE3 449 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 HHATLQ9HCP6 504 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms