RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ZNF225Q9UK10 706 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ZNF337Q9Y3M9 751 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ALG5Q9Y673 324 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 VPS37CA5D8V6 355 aaPredicted RBP5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 WIPF3A6NGB9 483 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 ANKRD30BLA7E2S9 258 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 PLRG1O43660 514 aaKnown RBP5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 CTDNEP1O95476 244 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 VIPP01282 170 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 CD1EP15812 388 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 TPSB2P20231 275 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 S1PR1P21453 382 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 FPR1P21462 350 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 DRD1P21728 446 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 ELK4P28324 431 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 MGAT2Q10469 447 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 MED21Q13503 144 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 MESDQ14696 234 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 TESK1Q15569 626 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 TRIP13Q15645 432 aaPredicted RBP5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 TPSAB1Q15661 275 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 ELOA3BQ3SY89 546 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 PTPN20Q4JDL3 420 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 MARC1Q5VT66 337 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 DCAF12L1Q5VU92 463 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 BTNL3Q6UXE8 466 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 TIPARPQ7Z3E1 657 aaKnown RBP5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 SCD5Q86SK9 330 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 CRLF3Q8IUI8 442 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 SHISA5Q8N114 240 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 TMEM156Q8N614 296 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 ELOA3Q8NG57 546 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 ASB11Q8WXH4 323 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 CMTM5Q96DZ9 223 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 SLC38A2Q96QD8 506 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 RAB40CQ96S21 281 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 MDFIQ99750 246 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 TRMT61BQ9BVS5 477 aaKnown RBP5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 LRRC2Q9BYS8 371 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 TRIM9Q9C026 710 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 SEMA6CQ9H3T2 930 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 CCDC134Q9H6E4 229 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 GREM2Q9H772 168 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 CALHM2Q9HA72 323 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 IL1RAPQ9NPH3 570 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 SEMA4GQ9NTN9 838 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 NCKIPSDQ9NZQ3 722 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 PADI3Q9ULW8 664 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 COPS3Q9UNS2 423 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 OSGIN2Q9Y236 505 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 PIGLQ9Y2B2 252 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 ALG6Q9Y672 507 aa5.67□□□□□ -1.5
SMARCE1-208ENST00000474246 METTL21EPA6NDL7 271 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 C2orf71A6NGG8 1288 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FAM90A8PA6NJQ4 464 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 DUXAA6NLW8 204 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 HEPACAM2A8MVW5 462 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 RAB27BO00194 218 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 DLGAP1O14490 977 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 CTDSPLO15194 276 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SDC3O75056 442 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ERBB2P04626 1255 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FAM90A13PP0C7W8 464 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FAM90A24PP0C7X0 464 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ZP3P21754 424 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 CD6P30203 668 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SLC6A6P31641 620 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 MPLP40238 635 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 AQP2P41181 271 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 RPL14P50914 215 aaKnown RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 BLKP51451 505 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 KPNA2P52292 529 aaKnown RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 NUTF2P61970 127 aaKnown RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ERVK-8P63133 956 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SSBP2P81877 361 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ORC2Q13416 577 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 TAF1AQ15573 450 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SBK1Q52WX2 424 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ESCO2Q56NI9 601 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 OR2G6Q5TZ20 316 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ABHD17BQ5VST6 288 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ABLIM2Q6H8Q1 611 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 GDF6Q6KF10 455 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 APOBEC3HQ6NTF7 200 aaKnown RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 S100A7AQ86SG5 101 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 LYG2Q86SG7 212 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 TTC9BQ8N6N2 239 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FBXO36Q8NEA4 188 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 OR9A2Q8NGT5 310 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 OR11L1Q8NGX0 322 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 GIPC3Q8TF64 312 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 LINC01599Q8WXQ3 324 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 LENG9Q96B70 501 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 COQ2Q96H96 371 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 OR2A14Q96R47 310 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 MYOCQ99972 504 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ABHD6Q9BV23 337 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 MND1Q9BWT6 205 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FSCN3Q9NQT6 498 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ENTPD7Q9NQZ7 604 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms