RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ZSCAN1Q8NBB4 408 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 OR4D9Q8NGE8 314 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 ZNF566Q969W8 418 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 OR1F2PQ96R84 312 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 MESP1Q9BRJ9 268 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 FANCEQ9HB96 536 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 C11orf16Q9NQ32 467 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 ERVK-18Q9QC07 812 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 MGAT4BQ9UQ53 548 aa16.68■□□□□ 0.26
VARS2-206ENST00000473916 CDHR4A6H8M9 788 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 ABCB7O75027 752 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 RPS6KA3P51812 740 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 NUP107P57740 925 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 SQSTM1Q13501 440 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 SERTAD2Q14140 314 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 BROXQ5VW32 411 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 SLC23A3Q6PIS1 610 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 GDF7Q7Z4P5 450 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 NMD3Q96D46 503 aaKnown RBP16.67■□□□□ 0.26
VARS2-206ENST00000473916 SENP5Q96HI0 755 aaPredicted RBP16.67■□□□□ 0.26
VARS2-206ENST00000473916 TRIM45Q9H8W5 580 aaPredicted RBP16.67■□□□□ 0.26
VARS2-206ENST00000473916 CACYBPQ9HB71 228 aaKnown RBP16.67■□□□□ 0.26
VARS2-206ENST00000473916 COL5A1P20908 1838 aaPredicted RBP16.67■□□□□ 0.26
VARS2-206ENST00000473916 HEATR5AQ86XA9 2040 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 ZAR1LA6NP61 321 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 AP3D1O14617 1153 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 TOX3O15405 576 aaPredicted RBP16.67■□□□□ 0.26
VARS2-206ENST00000473916 ADAM11O75078 769 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 AK1P00568 194 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 CCDC159P0C7I6 412 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 CNR2P34972 360 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 GABARAPL2P60520 117 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 RAB39AQ14964 217 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 PROX2Q3B8N5 592 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 PRICKLE2Q7Z3G6 844 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 TMEM255BQ8WV15 326 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 ATOH1Q92858 354 aaPredicted RBP16.67■□□□□ 0.26
VARS2-206ENST00000473916 DGCR6LQ9BY27 220 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 OR8D2Q9GZM6 311 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 POLR2J3Q9H1A7 115 aaKnown RBP16.67■□□□□ 0.26
VARS2-206ENST00000473916 APMAPQ9HDC9 416 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 AMBNQ9NP70 447 aa16.67■□□□□ 0.26
VARS2-206ENST00000473916 KIF26BQ2KJY2 2108 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 YKT6O15498 198 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 PIP5K1CO60331 668 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 CER1O95813 267 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 ANKRD34CP0C6C1 535 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 OSMP13725 252 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 GABRB1P18505 474 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 HOXD12P35452 270 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 NUDT6P53370 316 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 DAB2P98082 770 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 TOP3AQ13472 1001 aaPredicted RBP16.66■□□□□ 0.26
VARS2-206ENST00000473916 PWWP2BQ6NUJ5 590 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 QSOX2Q6ZRP7 698 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 IQCF1Q8N6M8 205 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 CEP76Q8TAP6 659 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 CNOT9Q92600 299 aaKnown RBP16.66■□□□□ 0.26
VARS2-206ENST00000473916 DGCR14Q96DF8 476 aaKnown RBP16.66■□□□□ 0.26
VARS2-206ENST00000473916 SLC41A3Q96GZ6 507 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 VN1R1Q9GZP7 353 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 CCDC90BQ9GZT6 254 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 CNIH4Q9P003 139 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 SLC7A7Q9UM01 511 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 CDC14AQ9UNH5 594 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 MMACHCQ9Y4U1 282 aa16.66■□□□□ 0.26
VARS2-206ENST00000473916 FAM20BO75063 409 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 CKMT1AP12532 417 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 SLC37A1P57057 533 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 ESRRGP62508 458 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 SLC35A2P78381 396 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 TRAM2Q15035 370 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 EIPR1Q53HC9 387 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 FAAH2Q6GMR7 532 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 WDR88Q6ZMY6 472 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 LANCL3Q6ZV70 420 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 GPR141Q7Z602 305 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 BCORP1Q8N888 145 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 ZBTB44Q8NCP5 570 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 RHOXF1Q8NHV9 184 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 NAT6Q93015 286 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 FLRT3Q9NZU0 649 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 BLOC1S6Q9UL45 172 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 MKL2Q9ULH7 1088 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 H3BN98 237 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 DDAH2O95865 285 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 ST3GAL3Q11203 375 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 NSDHLQ15738 373 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 NDUFAF6Q330K2 333 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 PHF19Q5T6S3 580 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 C1orf94Q6P1W5 598 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 ZNF730Q6ZMV8 503 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 KIF18BQ86Y91 864 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 SLC2A12Q8TD20 617 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 SLC38A4Q969I6 547 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 FAM46AQ96IP4 442 aaKnown RBP16.65■□□□□ 0.26
VARS2-206ENST00000473916 NODALQ96S42 347 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 DSN1Q9H410 356 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 Q9N2J8 555 aa16.65■□□□□ 0.26
VARS2-206ENST00000473916 OCIAD1Q9NX40 245 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms