RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 IGSF11Q5DX21 431 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 SGO1Q5FBB7 561 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CDKL4Q5MAI5 379 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CASP12Q6UXS9 341 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 LRRC28Q86X40 367 aaPredicted RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 CDH26Q8IXH8 852 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CMIPQ8IY22 773 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 FAM26EQ8N5C1 309 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 AQP11Q8NBQ7 271 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 VPS37AQ8NEZ2 397 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 C1orf216Q8TAB5 229 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 FOXJ1Q92949 421 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 GTPBP3Q969Y2 492 aaKnown RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 HIST1H2AHQ96KK5 128 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 TSSK3Q96PN8 268 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 THAP7Q9BT49 309 aaPredicted RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 GPR174Q9BXC1 333 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ZYG11BQ9C0D3 744 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ABCG5Q9H222 651 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 RDH14Q9HBH5 336 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 FGF20Q9NP95 211 aaPredicted RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 BRD7Q9NPI1 651 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ACER3Q9NUN7 267 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 MRPS18AQ9NVS2 196 aaKnown RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 KCTD5Q9NXV2 234 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 MALT1Q9UDY8 824 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 MGAT4BQ9UQ53 548 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 EXOSC1Q9Y3B2 195 aaKnown RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 HS3ST4Q9Y661 456 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CABIN1Q9Y6J0 2220 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 A0A1B0GVT2 93 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 METTL12A8MUP2 240 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 GTPBP1O00178 669 aaKnown RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 GREM1O60565 184 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 SOD1P00441 154 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 TCRBP04435 133 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CISD3P0C7P0 127 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 SSTR2P30874 369 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 NNMTP40261 264 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 RPS25P62851 125 aaKnown RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 RGNQ15493 299 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 LTB4RQ15722 352 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CCDC157Q569K6 752 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ZRANB3Q5FWF4 1079 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ANXA8L1Q5VT79 327 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ALG1LQ6GMV1 187 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ZNF600Q6ZNG1 722 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 HTR3DQ70Z44 454 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 SLC30A8Q8IWU4 369 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 FTMTQ8N4E7 242 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CAMKVQ8NCB2 501 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 OR4K2Q8NGD2 314 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 OR52I1Q8NGK6 324 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 OR5M3Q8NGP4 307 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 SCARB1Q8WTV0 552 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 SELENOMQ8WWX9 145 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 KCTD12Q96CX2 325 aaKnown RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 OTUB2Q96DC9 234 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CDC6Q99741 560 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 EGFL8Q99944 293 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 DPH2Q9BQC3 489 aaPredicted RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 TMPRSS13Q9BYE2 586 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CYSLTR2Q9NS75 346 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ELOVL2Q9NXB9 296 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 COA4Q9NYJ1 87 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 EXTL2Q9UBQ6 330 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CBLCQ9ULV8 474 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ENPP4Q9Y6X5 453 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 H7C0S8 307 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 BCAT2O15382 392 aaPredicted RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 TLX3O43711 291 aaPredicted RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 SELENOFO60613 162 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 PRAF2O60831 178 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 SNAPINO95295 136 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 CPSF4O95639 269 aaKnown RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 PDYNP01213 254 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 GASTP01350 101 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 IRF1P10914 325 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 AMD1P17707 334 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 LPOP22079 712 aaPredicted RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 BTCP35070 178 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 RORAP35398 523 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 EIF2S3P41091 472 aaKnown RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 AVPR1BP47901 424 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 CLDN6P56747 220 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 PYHIN1Q6K0P9 492 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 BTN2A1Q7KYR7 527 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 GLT6D1Q7Z4J2 308 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 ABI3BPQ7Z7G0 1075 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 DENND1CQ8IV53 801 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 STPG2Q8N412 459 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 OR52J3Q8NH60 311 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 SCAMP5Q8TAC9 235 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 SFXN2Q96NB2 322 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 IL4I1Q96RQ9 567 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 P2RY12Q9H244 342 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 NMNAT1Q9HAN9 279 aaPredicted RBP9.46□□□□□ -0.9
APTX-216ENST00000472896 SLC35C2Q9NQQ7 365 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 ASB6Q9NWX5 421 aa9.46□□□□□ -0.9
APTX-216ENST00000472896 DNAJC27Q9NZQ0 273 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms