RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 GGTA1PQ4G0N0 100 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 SH2D5Q6ZV89 423 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 ZNF551Q7Z340 670 aaPredicted RBP9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 NUFIP2Q7Z417 695 aaKnown RBP9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 SZRD1Q7Z422 152 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 KBTBD8Q8NFY9 601 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 RNF138Q8WVD3 245 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 IGFBPL1Q8WX77 278 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 IFT81Q8WYA0 676 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 S100PBPQ96BU1 408 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 RNF145Q96MT1 663 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 TMEM237Q96Q45 408 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 PAFAH2Q99487 392 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 REG4Q9BYZ8 158 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 TBL1XR1Q9BZK7 514 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 RAB17Q9H0T7 212 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 GLIPR2Q9H4G4 154 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 CXorf56Q9H5V9 222 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 PTGES2Q9H7Z7 377 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 FBXO34Q9NWN3 711 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 TAS2R9Q9NYW1 312 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 TMEM216Q9P0N5 145 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 LIPT1Q9Y234 373 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 EMC9Q9Y3B6 208 aa9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 MRPS18CQ9Y3D5 142 aaKnown RBP9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 MAGED1Q9Y5V3 778 aaPredicted RBP9.03□□□□□ -0.96
SCAMP3-205ENST00000472397 NPIPA5A0A0B4J1W7 369 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 A0A0J9YW62 118 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 NPIPA7E9PJI5 369 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 UPK1AO00322 258 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 DLX3O60479 287 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 SYNGR4O95473 234 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 IL33O95760 270 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 KRT6AP02538 564 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 KRT6BP04259 564 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 NPIPA8P0DM63 369 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 CASQ1P31415 396 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 TIA1P31483 386 aaKnown RBP eCLIP9.02□□□□□ -0.973e-8■■□□□ 12.1
SCAMP3-205ENST00000472397 MPIP34949 423 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 KRT6CP48668 564 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 RPS4XP62701 263 aaKnown RBP9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 TRA2BP62995 288 aaKnown RBP9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 OCRLQ01968 901 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 CAV1Q03135 178 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 ACSM2AQ08AH3 577 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 HSPB3Q12988 150 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 GUSBP1Q15486 140 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 ZNF678Q5SXM1 525 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 CCNJQ5T5M9 372 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 ACSM2BQ68CK6 577 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 ADAM5Q6NVV9 412 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 SYT10Q6XYQ8 523 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 GPRIN3Q6ZVF9 776 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 TMEM151AQ8N4L1 468 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 METTL25Q8N6Q8 603 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 OR2W6PQ8NHA6 318 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 CIDECQ96AQ7 238 aaPredicted RBP9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 DNAJA3Q96EY1 480 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 MRPL57Q9BQC6 102 aaKnown RBP9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 MRPL46Q9H2W6 279 aaKnown RBP9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 CDC42EP4Q9H3Q1 356 aaKnown RBP9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 BRF2Q9HAW0 419 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 SDHAF3Q9NRP4 125 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 PLSCR4Q9NRQ2 329 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 ZDHHC18Q9NUE0 388 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 ZNF701Q9NV72 531 aaPredicted RBP9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 DDX18Q9NVP1 670 aaKnown RBP9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 NMRK1Q9NWW6 199 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 ZNF175Q9Y473 711 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 PTGDR2Q9Y5Y4 395 aa9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 CHD3Q12873 2000 aaKnown RBP9.02□□□□□ -0.97
SCAMP3-205ENST00000472397 MYO1GB0I1T2 1018 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 OIP5O43482 229 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 AKAP10O43572 662 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 SSX4O60224 188 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 PLOD3O60568 738 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 RAMP1O60894 148 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 COQ9O75208 318 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 ULK1O75385 1050 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 ADAP00813 363 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 IGHV4-39P01824 125 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 TP53P04637 393 aaPredicted RBP9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 COL6A2P12110 1019 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 PHBP35232 272 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 MAGEA12P43365 314 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 CLK3P49761 638 aaKnown RBP9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 MRPS22P82650 360 aaKnown RBP9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 CSTF3Q12996 717 aaKnown RBP9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 ATRQ13535 2644 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 STK11Q15831 433 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 DECR1Q16698 335 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 NDUFAF6Q330K2 333 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 HBMQ6B0K9 141 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 TUSC5Q8IXB3 177 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 CCNYL1Q8N7R7 359 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 ZNF611Q8N823 705 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 OR6K3Q8NGY3 331 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 OR4C3Q8NH37 302 aa9.01□□□□□ -0.97
SCAMP3-205ENST00000472397 POC1BQ8TC44 478 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms