RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 CT45A8P0DMV1 189 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 CT45A9P0DMV2 189 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 COL6A2P12110 1019 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 MPIP34949 423 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 CORO7P57737 925 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 B3GALT5-AS1P59052 145 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 RPS4XP62701 263 aaKnown RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 CSTF3Q12996 717 aaKnown RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 ZNHIT3Q15649 155 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 DECR1Q16698 335 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 EXOC3L2Q2M3D2 409 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 CYP27C1Q4G0S4 372 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 SPIN4Q56A73 249 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 CT45A2Q5DJT8 189 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 PPP4R4Q6NUP7 873 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 SH2D5Q6ZV89 423 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 SLC44A2Q8IWA5 706 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 METTL25Q8N6Q8 603 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF611Q8N823 705 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 FADS6Q8N9I5 356 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 SPATA4Q8NEY3 305 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 OR2M3Q8NG83 312 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 OR9A2Q8NGT5 310 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 UHMK1Q8TAS1 419 aaKnown RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 FNDC9Q8TBE3 224 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 FBXO25Q8TCJ0 367 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 WFDC12Q8WWY7 111 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 EXOSC8Q96B26 276 aaKnown RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 EFHD2Q96C19 240 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 MRRFQ96E11 262 aaKnown RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 TRMT61AQ96FX7 289 aaKnown RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 GMPPAQ96IJ6 420 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 MEGF10Q96KG7 1140 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 MARK4Q96L34 752 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 GPR78Q96P69 363 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 TACO1Q9BSH4 297 aaKnown RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 OR10A4Q9H209 315 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 DSN1Q9H410 356 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 C3orf14Q9HBI5 128 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 ZBTB26Q9HCK0 441 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 SRA1Q9HD15 236 aaKnown RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 Q9N2J8 555 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 NGBQ9NPG2 151 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 GLRX2Q9NS18 164 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF701Q9NV72 531 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 FAM120CQ9NX05 1096 aaKnown RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 HEY2Q9UBP5 337 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 MCTS1Q9ULC4 181 aaKnown RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 STK38LQ9Y2H1 464 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 OR2M5A3KFT3 312 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 TTC36A6NLP5 189 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 HS3ST1O14792 307 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 SYNGR4O95473 234 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 FESP07332 822 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 INHBAP08476 426 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 IL3P08700 152 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF17P17021 662 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 SERPINB9P50453 376 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 GAS1P54826 345 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 CLDN15P56746 228 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 MRPS25P82663 173 aaKnown RBP8.19□□□□□ -1.1
CPSF4-211ENST00000471455 ACSM2AQ08AH3 577 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 STX5Q13190 355 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 VEZF1Q14119 521 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 RASA2Q15283 850 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 PDSS1Q5T2R2 415 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 ACSM2BQ68CK6 577 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 HEPHL1Q6MZM0 1159 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 PODNL1Q6PEZ8 512 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 NPSR1Q6W5P4 371 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 Q6ZS46 218 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 BEND4Q6ZU67 534 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF610Q8N9Z0 462 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF483Q8TF39 744 aaPredicted RBP8.19□□□□□ -1.1
CPSF4-211ENST00000471455 KAT2AQ92830 837 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 C1GALT1C1Q96EU7 318 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 BBS4Q96RK4 519 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 MRPL57Q9BQC6 102 aaKnown RBP8.19□□□□□ -1.1
CPSF4-211ENST00000471455 TBL1XR1Q9BZK7 514 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 MRPL46Q9H2W6 279 aaKnown RBP8.19□□□□□ -1.1
CPSF4-211ENST00000471455 SLC35C2Q9NQQ7 365 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 GPR52Q9Y2T5 361 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF337Q9Y3M9 751 aa8.19□□□□□ -1.1
CPSF4-211ENST00000471455 RAI1Q7Z5J4 1906 aaPredicted RBP8.19□□□□□ -1.1
CPSF4-211ENST00000471455 CHD3Q12873 2000 aaKnown RBP8.19□□□□□ -1.1
CPSF4-211ENST00000471455 A0A087WV62 115 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 A0A087WZY1 265 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 HMX2A2RU54 273 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 F8W735 103 aaPredicted RBP8.18□□□□□ -1.1
CPSF4-211ENST00000471455 TLX2O43763 284 aaPredicted RBP8.18□□□□□ -1.1
CPSF4-211ENST00000471455 ADAM11O75078 769 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 SS18L1O75177 396 aaPredicted RBP8.18□□□□□ -1.1
CPSF4-211ENST00000471455 ULK1O75385 1050 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 PABPC4LP0CB38 370 aaKnown RBP8.18□□□□□ -1.1
CPSF4-211ENST00000471455 TAC1P20366 129 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 LOXP28300 417 aaPredicted RBP8.18□□□□□ -1.1
CPSF4-211ENST00000471455 HMOX2P30519 316 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 NTSP30990 170 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 IDUAP35475 653 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 GUCY2DQ02846 1103 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms