RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ACTRT3Q9BYD9 372 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 HHATLQ9HCP6 504 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 HEBP1Q9NRV9 189 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 HSFX1Q9UBD0 423 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 AK6Q9Y3D8 172 aaKnown RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF816-ZNF321PA0A0X1KG74 233 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 POM121CA8CG34 1229 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 B4DXG7 233 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 KRBOX1C9JBD0 128 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 PRKYO43930 277 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 PFKMP08237 780 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 PRSS3P35030 304 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MMP14P50281 582 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 EFNA3P52797 238 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SLC18A1P54219 525 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 FAM214AQ32MH5 1076 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ACSM3Q53FZ2 586 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 C9orf135Q5VTT2 229 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 RNLSQ5VYX0 342 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 KIAA0930Q6ICG6 404 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF765Q7L2R6 523 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF321PQ8N8H1 164 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SCCPDHQ8NBX0 429 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 OR2M7Q8NG81 312 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SYNPRQ8TBG9 265 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 TSGA13Q96PP4 275 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MFFQ9GZY8 342 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 BARX1Q9HBU1 254 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 V9GYS6 101 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SLC22A31A6NKX4 558 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 PRAMEF2O60811 474 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 AOC2O75106 756 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SNAP29O95721 258 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 AKAIN1P0CW23 69 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ACPPP15309 386 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SHMT2P34897 504 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SNCAP37840 140 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MGAT3Q09327 533 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF763Q0D2J5 394 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 CCBE1Q6UXH8 406 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 CD163Q86VB7 1156 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 DCUN1D3Q8IWE4 304 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 LSMEM2Q8N112 164 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 KDM8Q8N371 416 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 CELF5Q8N6W0 485 aaKnown RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MIB2Q96AX9 1013 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ANKRD9Q96BM1 317 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 FBXL18Q96ME1 805 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MICU1Q9BPX6 476 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 HCAR1Q9BXC0 346 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 OR11A1Q9GZK7 315 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MMP28Q9H239 520 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 OR51E2Q9H255 320 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 GKN1Q9NS71 199 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 WNT6Q9Y6F9 365 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 TMEM88BA6NKF7 163 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF736B4DX44 427 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MSTNO14793 375 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 EMC8O43402 210 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 TBX18O95935 607 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ASGR2P07307 311 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SPATA31C1P0DKV0 1188 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF28P17035 718 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 TBPP20226 339 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MEOX1P50221 254 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 EPHA5P54756 1037 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 GDF10P55107 478 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 CTXN1P60606 82 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 RPS26P62854 115 aaKnown RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 FPGSQ05932 587 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 DMWDQ09019 674 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 VAMP3Q15836 100 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 MEP1BQ16820 701 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 UPP1Q16831 310 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 TP53I3Q53FA7 332 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ABHD17BQ5VST6 288 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 INTS5Q6P9B9 1019 aaKnown RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 COX15Q7KZN9 410 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ERMP1Q7Z2K6 904 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 GCNT2Q8N0V5 402 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 BANPQ8N9N5 519 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 CHDHQ8NE62 594 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 OR2T35Q8NGX2 323 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SFXN5Q8TD22 340 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SLC16A10Q8TF71 515 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 CLEC4CQ8WTT0 213 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 ATF6BQ99941 703 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 SMG9Q9H0W8 520 aaKnown RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 OR10A5Q9H207 317 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 OR10A2Q9H208 303 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 DECR2Q9NUI1 292 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 LUZP4Q9P127 313 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 CPNE7Q9UBL6 633 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 PURGQ9UJV8 347 aaKnown RBP6.54□□□□□ -1.36
BRCA1-210ENST00000471181 GPR52Q9Y2T5 361 aa6.54□□□□□ -1.36
BRCA1-210ENST00000471181 COL1A2P08123 1366 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CAMTA1Q9Y6Y1 1673 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 A0A0D9SG52 128 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 HIDE1A8MVS5 230 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 STSP08842 583 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms