RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ERN1O75460 977 aaKnown RBP8.29□□□□□ -1.08
SF3A1-206ENST00000471037 ERAL1O75616 437 aaKnown RBP8.29□□□□□ -1.08
SF3A1-206ENST00000471037 GOSR1O95249 250 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 KCNH1O95259 989 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 GPR75O95800 540 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 EPPINO95925 133 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 KRT16P08779 473 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 BMP5P22003 454 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 MPIP34949 423 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 TIMP3P35625 211 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 NUDT2P50583 147 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 KCNJ2P63252 427 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 MXRA7P84157 204 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 PLIN5Q00G26 463 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 BIKQ13323 160 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 SNTB1Q13884 538 aaKnown RBP8.29□□□□□ -1.08
SF3A1-206ENST00000471037 NFYCQ13952 458 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 TRMT5Q32P41 509 aaKnown RBP8.29□□□□□ -1.08
SF3A1-206ENST00000471037 ACSF3Q4G176 576 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-206ENST00000471037 PAGE3Q5JUK9 113 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 C6orf10Q5SRN2 563 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 PRAMEF20Q5VT98 475 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 POMZP3Q6PJE2 187 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 SLC2A7Q6PXP3 512 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 C16orf89Q6UX73 402 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 RETREG3Q86VR2 466 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 LACC1Q8IV20 430 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 NAXEQ8NCW5 288 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 NUDT8Q8WV74 236 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 OR5P2Q8WZ92 322 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 GTF2H4Q92759 462 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 UCN3Q969E3 161 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 CIDECQ96AQ7 238 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-206ENST00000471037 CNRIP1Q96F85 164 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-206ENST00000471037 FBXL20Q96IG2 436 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 ART5Q96L15 291 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 ZNF681Q96N22 645 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 PANX1Q96RD7 426 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 BBS4Q96RK4 519 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 PELOQ9BRX2 385 aaKnown RBP8.29□□□□□ -1.08
SF3A1-206ENST00000471037 C1orf21Q9H246 121 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 SLC6A15Q9H2J7 730 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 GSX1Q9H4S2 264 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-206ENST00000471037 PROK2Q9HC23 129 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 SERHLQ9NQF3 203 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 ALKBH4Q9NXW9 302 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 ZNF629Q9UEG4 869 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-206ENST00000471037 CBLCQ9ULV8 474 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 PCDHGB4Q9UN71 923 aa8.29□□□□□ -1.08
SF3A1-206ENST00000471037 AKAP6Q13023 2319 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 DNHD1Q96M86 4753 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 C15orf38-AP3S2A0A0A6YYH1 394 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 ANKRD33BA6NCL7 494 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 ERICH4A6NGS2 130 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 AHRRA9YTQ3 701 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 DYRK3O43781 588 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 SLITRK5O94991 958 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 ATE1O95260 518 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 C6orf47O95873 294 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 RAF1P04049 648 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 FBXO45P0C2W1 286 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 ZCCHC18P0CG32 403 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 CPMP14384 443 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 PORP16435 677 aaPredicted RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 XKP51811 444 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 MANFP55145 182 aaKnown RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 ID2Q02363 134 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 CRYZQ08257 329 aaKnown RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 NTRK2Q16620 822 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 PRSS53Q2L4Q9 553 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 SPRED3Q2MJR0 410 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 DEFB113Q30KQ7 82 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 DNAL1Q4LDG9 190 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 TBCELQ5QJ74 424 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 LRIF1Q5T3J3 769 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 ZNF771Q7L3S4 317 aaPredicted RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 ARPINQ7Z6K5 226 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 DHDDSQ86SQ9 333 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 BIVMQ86UB2 503 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 ANKRD46Q86W74 232 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 CLECL1Q8IZS7 167 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 PGAM4Q8N0Y7 254 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 TRIML2Q8N7C3 387 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 RBM15BQ8NDT2 890 aaKnown RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 TNIP2Q8NFZ5 429 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 OR10G3Q8NGC4 313 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 OR4A15Q8NGL6 344 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 SLC7A6OSQ96CW6 309 aaPredicted RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 LRRC58Q96CX6 371 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 RBM18Q96H35 190 aaKnown RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 AMDHD1Q96NU7 426 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 DGAT2Q96PD7 388 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 HOPXQ9BPY8 73 aaPredicted RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 PRDM14Q9GZV8 571 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 LRMDAQ9H2I8 198 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 TAS2R9Q9NYW1 312 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 CNOT11Q9UKZ1 510 aaKnown RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 HRNRQ86YZ3 2850 aaPredicted RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 FLNAP21333 2647 aaKnown RBP8.28□□□□□ -1.08
SF3A1-206ENST00000471037 ARHGAP21Q5T5U3 1957 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms