RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 REPIN1Q9BWE0 567 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-208ENST00000470737 TBL1XR1Q9BZK7 514 aa12.47□□□□□ -0.41
SEMA3F-208ENST00000470737 C3orf14Q9HBI5 128 aa12.47□□□□□ -0.41
SEMA3F-208ENST00000470737 FAM120CQ9NX05 1096 aaKnown RBP12.47□□□□□ -0.41
SEMA3F-208ENST00000470737 DCDC2Q9UHG0 476 aa12.47□□□□□ -0.41
SEMA3F-208ENST00000470737 STK38LQ9Y2H1 464 aa12.47□□□□□ -0.41
SEMA3F-208ENST00000470737 AP4B1Q9Y6B7 739 aa12.47□□□□□ -0.41
SEMA3F-208ENST00000470737 USF3Q68DE3 2245 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 CHD3Q12873 2000 aaKnown RBP12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 A0A087WV62 115 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 B4DXG7 233 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 SHBGP04278 402 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 ANXA4P09525 319 aaPredicted RBP12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 SBK3P0C264 359 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 CHN1P15882 459 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 NTSP30990 170 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 EIF1AXP47813 144 aaKnown RBP12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 NCBP2P52298 156 aaKnown RBP eCLIP12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 ATP5J2P56134 94 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 RAE1P78406 368 aaKnown RBP12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 PSG6Q00889 435 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 BTKQ06187 659 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 GPRIN3Q6ZVF9 776 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 CXXC5Q7LFL8 322 aaKnown RBP12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 STK32CQ86UX6 486 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 SPATA3Q8NHX4 192 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 APIPQ96GX9 242 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 TMEM109Q9BVC6 243 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 EBPLQ9BY08 206 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 PARD6BQ9BYG5 372 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 ACPTQ9BZG2 426 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 HHATLQ9HCP6 504 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 MIEF1Q9NQG6 463 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 DDX18Q9NVP1 670 aaKnown RBP12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 PAQR5Q9NXK6 330 aaPredicted RBP12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 ZNF225Q9UK10 706 aa12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 MCTS1Q9ULC4 181 aaKnown RBP12.46□□□□□ -0.41
SEMA3F-208ENST00000470737 FBN3Q75N90 2809 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 EIF1AYO14602 144 aaKnown RBP12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 SYNGR4O95473 234 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 IL33O95760 270 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 JUNP05412 331 aaKnown RBP12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 LOXP28300 417 aaPredicted RBP12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 NAA20P61599 178 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 C17orf67Q0P5P2 114 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 C2orf80Q0P641 193 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 GUSBP1Q15486 140 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 SPDYAQ5MJ70 313 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 ZNF678Q5SXM1 525 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 TMEM107Q6UX40 140 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 MARCH3Q86UD3 253 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 WFDC8Q8IUA0 241 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 GMPPAQ96IJ6 420 aaPredicted RBP12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 PLSCR4Q9NRQ2 329 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 FLRT3Q9NZU0 649 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 LGALS13Q9UHV8 139 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 GRID1Q9ULK0 1009 aa12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 C19orf53Q9UNZ5 99 aaPredicted RBP12.45□□□□□ -0.42
SEMA3F-208ENST00000470737 MYO1GB0I1T2 1018 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 HS3ST1O14792 307 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 GMFGO60234 142 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 GLRA3O75311 464 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 AQP8O94778 261 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 KCNH1O95259 989 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 ENO1P06733 434 aaKnown RBP12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 THBDP07204 575 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 PAX1P15863 534 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 DDCP20711 480 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 CRHR1P34998 444 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 CCT5P48643 541 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 ZNF763Q0D2J5 394 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 IMPG1Q17R60 797 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 UNC50Q53HI1 259 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 PDSS1Q5T2R2 415 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 FAM219BQ5XKK7 198 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 GALNT18Q6P9A2 607 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 BEND4Q6ZU67 534 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 SLC22A9Q8IVM8 553 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 WDR75Q8IWA0 830 aaKnown RBP12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 ZNF611Q8N823 705 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 PLPPR2Q96GM1 343 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 TACO1Q9BSH4 297 aaKnown RBP12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 GLRX2Q9NS18 164 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 MKS1Q9NXB0 559 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 TMEM216Q9P0N5 145 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 TBK1Q9UHD2 729 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 CLEC4AQ9UMR7 237 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 VDAC3Q9Y277 283 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 ZANQ9Y493 2812 aa12.44□□□□□ -0.42
SEMA3F-208ENST00000470737 TTC36A6NLP5 189 aa12.43□□□□□ -0.42
SEMA3F-208ENST00000470737 KLF4O43474 513 aa12.43□□□□□ -0.42
SEMA3F-208ENST00000470737 CRLF1O75462 422 aa12.43□□□□□ -0.42
SEMA3F-208ENST00000470737 ANGPTL1O95841 491 aa12.43□□□□□ -0.42
SEMA3F-208ENST00000470737 PYGBP11216 843 aa12.43□□□□□ -0.42
SEMA3F-208ENST00000470737 ZNF17P17021 662 aa12.43□□□□□ -0.42
SEMA3F-208ENST00000470737 ATP5F1P24539 256 aaPredicted RBP12.43□□□□□ -0.42
SEMA3F-208ENST00000470737 HTR6P50406 440 aa12.43□□□□□ -0.42
SEMA3F-208ENST00000470737 PKNOX1P55347 436 aa12.43□□□□□ -0.42
SEMA3F-208ENST00000470737 SLC18A2Q05940 514 aa12.43□□□□□ -0.42
SEMA3F-208ENST00000470737 LCP2Q13094 533 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms