RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 RNPS1Q15287 305 aaKnown RBP10.59□□□□□ -0.71
LSM2-209ENST00000470083 IQCCQ4KMZ1 466 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 MIDNQ504T8 468 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 TIMM23BQ5SRD1 257 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 STEAP4Q687X5 459 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 HBMQ6B0K9 141 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 TMEM108Q6UXF1 575 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 B3GLCTQ6Y288 498 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 Q6ZT83 130 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 ESPNLQ6ZVH7 1005 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 P2RY8Q86VZ1 359 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 SLC44A2Q8IWA5 706 aaPredicted RBP10.59□□□□□ -0.71
LSM2-209ENST00000470083 GTPBP8Q8N3Z3 284 aaPredicted RBP10.59□□□□□ -0.71
LSM2-209ENST00000470083 OR4N2Q8NGD1 307 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 WDR20Q8TBZ3 569 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 ZNF675Q8TD23 568 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 DUSP19Q8WTR2 217 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 KCTD4Q8WVF5 259 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 KLHL29Q96CT2 875 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 CNRIP1Q96F85 164 aaPredicted RBP10.59□□□□□ -0.71
LSM2-209ENST00000470083 FOXN4Q96NZ1 517 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 SERPINI1Q99574 410 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 BAG1Q99933 345 aaPredicted RBP10.59□□□□□ -0.71
LSM2-209ENST00000470083 MCMBPQ9BTE3 642 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 RHOJQ9H4E5 214 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 GP6Q9HCN6 339 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 FAM120CQ9NX05 1096 aaKnown RBP10.59□□□□□ -0.71
LSM2-209ENST00000470083 NUDT4Q9NZJ9 180 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 PSME2Q9UL46 239 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 GUCA1BQ9UMX6 200 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 OR10H1Q9Y4A9 318 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 PMF1-BGLAPU3KQ54 211 aa10.59□□□□□ -0.71
LSM2-209ENST00000470083 NBEAL2Q6ZNJ1 2754 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 LOC390937A0A1W2PQ73 354 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 UGDHO60701 494 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 GUCY1B2O75343 617 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 NME6O75414 186 aaPredicted RBP10.58□□□□□ -0.72
LSM2-209ENST00000470083 LYZL6O75951 148 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 PTAFRP25105 342 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 MAPK12P53778 367 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 RAC1P63000 192 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 SPOCK1Q08629 439 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 MGAT5Q09328 741 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 ZNF239Q16600 458 aaKnown RBP10.58□□□□□ -0.72
LSM2-209ENST00000470083 CPSF6Q16630 551 aaKnown RBP eCLIP10.58□□□□□ -0.72
LSM2-209ENST00000470083 ERCC6LQ2NKX8 1250 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 ZNF628Q5EBL2 1059 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 CCNYL2Q5T2Q4 361 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 PDSS1Q5T2R2 415 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 DEF8Q6ZN54 512 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 PAGE2Q7Z2X7 111 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 TMEM139Q8IV31 216 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 TUSC5Q8IXB3 177 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 TEX9Q8N6V9 391 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 LRRC17Q8N6Y2 441 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 ZNF540Q8NDQ6 660 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 ZNF681Q96N22 645 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 ANKRA2Q9H9E1 313 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 MYOZ1Q9NP98 299 aaPredicted RBP10.58□□□□□ -0.72
LSM2-209ENST00000470083 FLRT3Q9NZU0 649 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 CHMP2BQ9UQN3 213 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 VDAC3Q9Y277 283 aa10.58□□□□□ -0.72
LSM2-209ENST00000470083 VWFP04275 2813 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 A0A087WZY1 265 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 A0A0J9YW62 118 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 C7orf72A4D263 438 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 PHGDHO43175 533 aaKnown RBP10.57□□□□□ -0.72
LSM2-209ENST00000470083 OPN1LWP04000 364 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 GGT1P19440 569 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 ME2P23368 584 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 CD40P25942 277 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 ELK3P41970 407 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 CLK3P49761 638 aaKnown RBP10.57□□□□□ -0.72
LSM2-209ENST00000470083 CARD18P57730 90 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 ILF2Q12905 390 aaKnown RBP10.57□□□□□ -0.72
LSM2-209ENST00000470083 MORF4L2Q15014 288 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 ACAP2Q15057 778 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 AWAT1Q58HT5 328 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 HP1BP3Q5SSJ5 553 aaPredicted RBP10.57□□□□□ -0.72
LSM2-209ENST00000470083 HIST2H2BDQ6DRA6 164 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 FAM180BQ6P0A1 224 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 CCDC137Q6PK04 289 aaKnown RBP10.57□□□□□ -0.72
LSM2-209ENST00000470083 MARCH3Q86UD3 253 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 CEP112Q8N8E3 955 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 OR2W6PQ8NHA6 318 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 STAG3L4Q8TBR4 150 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 TRPC4APQ8TEL6 797 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 OSTF1Q92882 214 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 TSPAN17Q96FV3 270 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 REXO5Q96IC2 774 aaKnown RBP10.57□□□□□ -0.72
LSM2-209ENST00000470083 UBXN10Q96LJ8 280 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 INPP5KQ9BT40 448 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 RBM4Q9BWF3 364 aaKnown RBP10.57□□□□□ -0.72
LSM2-209ENST00000470083 BPESC1Q9GZL8 116 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 TMEM185BQ9H7F4 350 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 METTL17Q9H7H0 456 aaPredicted RBP10.57□□□□□ -0.72
LSM2-209ENST00000470083 CAB39LQ9H9S4 337 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 ANGPTL3Q9Y5C1 460 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 ZNF780BQ9Y6R6 833 aa10.57□□□□□ -0.72
LSM2-209ENST00000470083 OR5H1A6NKK0 313 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms