RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-210	ENST00000469565	LIPT1	Q9Y234	373 aa		12.51	□□□□□ -0.41
LMNA-210	ENST00000469565	WDR45	Q9Y484	360 aa		12.51	□□□□□ -0.41
LMNA-210	ENST00000469565	FLNC	Q14315	2725 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	C15orf38-AP3S2	A0A0A6YYH1	394 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	PRAMEF27	A3QJZ7	478 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	PRAMEF25	A6NGN4	478 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	ENO4	A6NNW6	628 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	PEX1	O43933	1283 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	NME2P1	O60361	137 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	FCMR	O60667	390 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	NME2	P22392	152 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	CALB2	P22676	271 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	SLC6A2	P23975	617 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	EVI2B	P34910	448 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	DCT	P40126	519 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	CASP3	P42574	277 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	MASP1	P48740	699 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	MEOX1	P50221	254 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	RNF144A	P50876	292 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	PSME3	P61289	254 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	KCNJ2	P63252	427 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	SLC25A3	Q00325	362 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	PLGLB1	Q02325	96 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	CHRNE	Q04844	493 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	GNA13	Q14344	377 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	HACD2	Q6Y1H2	254 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	ARPIN	Q7Z6K5	226 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	MARCH3	Q86UD3	253 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	IFNE	Q86WN2	208 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	SULF2	Q8IWU5	870 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	ZNF619	Q8N2I2	560 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	GATS	Q8NAP1	163 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	FAM98A	Q8NCA5	519 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	OR4C3	Q8NH37	302 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	NFKBID	Q8NI38	313 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	GRHL3	Q8TE85	626 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	SLC38A5	Q8WUX1	472 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	PNPLA2	Q96AD5	504 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	SCMH1	Q96GD3	660 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	TRNT1	Q96Q11	434 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	DOHH	Q9BU89	302 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	OSBPL11	Q9BXB4	747 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	TBL1XR1	Q9BZK7	514 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	KAT8	Q9H7Z6	458 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	GALNT9	Q9HCQ5	603 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	UBQLN4	Q9NRR5	601 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	DEPP	Q9NTK1	212 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	ADA2	Q9NZK5	511 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	CALML5	Q9NZT1	146 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	GMEB1	Q9Y692	573 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	HEATR5A	Q86XA9	2040 aa		12.5	□□□□□ -0.41
LMNA-210	ENST00000469565	NCKAP5	O14513	1909 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565		A0A0G2JMM0	328 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565		A0A1W2PPB8	328 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565		A0A1W2PRS3	328 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	KIR3DP1	A8MWS1	328 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	SCD	O00767	359 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	GNB5	O14775	395 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	TNFRSF21	O75509	655 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	RASAL1	O95294	804 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	OXSR1	O95747	527 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	CHRM4	P08173	479 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	TFPT	P0C1Z6	253 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	T-ENOL	P0DO92	83 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	ARAF	P10398	606 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	RFC3	P40938	356 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	SLC7A2	P52569	658 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	CRISP3	P54108	245 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	ATP12A	P54707	1039 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	CDK6	Q00534	326 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	PMP22	Q01453	160 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	SCARB2	Q14108	478 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	TYW3	Q6IPR3	259 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	SLC30A6	Q6NXT4	461 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	C16orf89	Q6UX73	402 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	FRRS1	Q6ZNA5	592 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	LRRC74B	Q6ZQY2	392 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	RINL	Q6ZS11	566 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	PACS2	Q86VP3	889 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	SLC15A3	Q8IY34	581 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	ZNF527	Q8NB42	609 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	FBXO27	Q8NI29	283 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	TMEM19	Q96HH6	336 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	SECISBP2	Q96T21	854 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	FAM173A	Q9BQD7	235 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	GPATCH1	Q9BRR8	931 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	ZNF350	Q9GZX5	532 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	HOXD1	Q9GZZ0	328 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	CACYBP	Q9HB71	228 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	SH2D2A	Q9NP31	389 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	A4GALT	Q9NPC4	353 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	CMTM6	Q9NX76	183 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	DNAJC13	O75165	2243 aa		12.49	□□□□□ -0.41
LMNA-210	ENST00000469565	PINLYP	A6NC86	204 aa		12.48	□□□□□ -0.41
LMNA-210	ENST00000469565	TTLL8	A6PVC2	850 aa		12.48	□□□□□ -0.41
LMNA-210	ENST00000469565	GMFG	O60234	142 aa		12.48	□□□□□ -0.41
LMNA-210	ENST00000469565	FADS1	O60427	444 aa		12.48	□□□□□ -0.41
LMNA-210	ENST00000469565	BMP2	P12643	396 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms