RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 AGAP20933 346 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 SAT1P21673 171 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 SDHBP21912 280 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PRKACGP22612 351 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TNFSF4P23510 183 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PTPN3P26045 913 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 APEX1P27695 318 aaKnown RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CCR7P32248 378 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 KDELR2P33947 212 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PTGFRP43088 359 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CRATP43155 626 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 HTR5AP47898 357 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 MTNR1BP49286 362 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 HMGA2P52926 109 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 WNT4P56705 351 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 UFM1P61960 85 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 HOXC5Q00444 222 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TNFRSF17Q02223 184 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 DSC2Q02487 901 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 NHLH2Q02577 135 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 RBBP4Q09028 425 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 C2orf80Q0P641 193 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 RAB40BQ12829 278 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM115Q12893 351 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PDZK1IP1Q13113 114 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 GRB7Q14451 532 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 SMN1Q16637 294 aaKnown RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 HAGHQ16775 308 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 NDUFA9Q16795 377 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 EXOC3L2Q2M3D2 409 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 HIST2H3PS2Q5TEC6 136 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 HECTD2Q5U5R9 776 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 BSPRYQ5W0U4 402 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 HBMQ6B0K9 141 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CLEC6AQ6EIG7 209 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PTRHD1Q6GMV3 140 aaKnown RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 H3F3CQ6NXT2 135 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 LPCAT3Q6P1A2 487 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 SLC39A4Q6P5W5 647 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 NCEH1Q6PIU2 408 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 LRRN1Q6UXK5 716 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TTLL10Q6ZVT0 673 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PTCHD4Q6ZW05 846 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TMUB2Q71RG4 321 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CEP68Q76N32 757 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 KANSL1Q7Z3B3 1105 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 DPPA2Q7Z7J5 298 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM179BQ7Z7N9 219 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 NAA40Q86UY6 237 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 SERINC5Q86VE9 423 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CRYBG2Q8N1P7 616 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 FBXO39Q8N4B4 442 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 MFSD9Q8NBP5 474 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CCNYQ8ND76 341 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 SLC24A4Q8NFF2 622 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 OR6C4Q8NGE1 309 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 OR8J1Q8NGP2 316 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 COQ8AQ8NI60 647 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 SLC7A13Q8TCU3 470 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 GNPDA2Q8TDQ7 276 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 LCN9Q8WX39 176 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TFGQ92734 400 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 EDAQ92838 391 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 RFKQ969G6 155 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 ARL11Q969Q4 196 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM203Q969S6 136 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PNPLA2Q96AD5 504 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 SLC22A18Q96BI1 424 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PHF21BQ96EK2 531 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 ELMOD3Q96FG2 381 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 ATXN7L3BQ96GX2 97 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 FCRL5Q96RD9 977 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TBL1YQ9BQ87 522 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 UTP23Q9BRU9 249 aaKnown RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 C11orf84Q9BUA3 381 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 WRAP53Q9BUR4 548 aaKnown RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CACNG6Q9BXT2 260 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 DPY30Q9C005 99 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 DERL2Q9GZP9 239 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TOLLIPQ9H0E2 274 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF768Q9H5H4 540 aaKnown RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 ZCCHC4Q9H5U6 513 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 BCO1Q9HAY6 547 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 SLC25A19Q9HC21 320 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 SLC6A20Q9NP91 592 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 THSD1Q9NS62 852 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 NUDT15Q9NV35 164 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 C14orf105Q9NVL8 296 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 GPR83Q9NYM4 423 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TAS2R13Q9NYV9 303 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 NFKBIL1Q9UBC1 381 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 GIMAP2Q9UG22 337 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TRPS1Q9UHF7 1281 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 FBXL4Q9UKA2 621 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PCDHA10Q9Y5I2 948 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PCYT1BQ9Y5K3 369 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PIAS3Q9Y6X2 628 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CITO14578 2027 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TRAV19A0A0A6YYK7 116 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 SLC12A8A0AV02 714 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms