RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CSRP2Q16527 193 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 DECR1Q16698 335 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 PDZK1Q5T2W1 519 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 HLA-DQA1Q5Y7H0 255 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 C8orf59Q8N0T1 100 aaPredicted RBP17.55■□□□□ 0.4
SMC4-209ENST00000468653 OR1N1Q8NGS0 311 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 GAL3ST4Q96RP7 486 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 MCHR1Q99705 422 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 PSD2Q9BQI7 771 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 SLC26A1Q9H2B4 701 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 POFUT2Q9Y2G5 429 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 LOXL2Q9Y4K0 774 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 C2orf92A0A1B0GVN3 265 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 TMX2-CTNND1H3BSU7 103 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 SLC16A6O15403 523 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 PRKNO60260 465 aaPredicted RBP17.54■□□□□ 0.4
SMC4-209ENST00000468653 OXSR1O95747 527 aaPredicted RBP17.54■□□□□ 0.4
SMC4-209ENST00000468653 DRD5P21918 477 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 SLC5A2P31639 672 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 PSMD4P55036 377 aaKnown RBP17.54■□□□□ 0.4
SMC4-209ENST00000468653 DCAF7P61962 342 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 TTC33Q6PID6 262 aaPredicted RBP17.54■□□□□ 0.4
SMC4-209ENST00000468653 PLEKHM3Q6ZWE6 761 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 SLC29A4Q7RTT9 530 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 RANBP3LQ86VV4 465 aaPredicted RBP17.54■□□□□ 0.4
SMC4-209ENST00000468653 TSPYL5Q86VY4 417 aaPredicted RBP17.54■□□□□ 0.4
SMC4-209ENST00000468653 AQP11Q8NBQ7 271 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 MR1Q95460 341 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 LCORQ96JN0 433 aaPredicted RBP17.54■□□□□ 0.4
SMC4-209ENST00000468653 LRFN5Q96NI6 719 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 CRB3Q9BUF7 120 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 NXF5Q9H1B4 397 aaKnown RBP17.54■□□□□ 0.4
SMC4-209ENST00000468653 PCDHGA10Q9Y5H3 936 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 DMDP11532 3685 aa17.54■□□□□ 0.4
SMC4-209ENST00000468653 IGHV3-20A0A0C4DH32 117 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 CDHR4A6H8M9 788 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 FRG2CA6NGY1 282 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 BCKDKO14874 412 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 OR10H3O60404 316 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 CNOT3O75175 753 aaKnown RBP17.53■□□□□ 0.4
SMC4-209ENST00000468653 POU2F1P14859 743 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 ITIH1P19827 911 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 ATP12AP54707 1039 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 INSM1Q01101 510 aaPredicted RBP17.53■□□□□ 0.4
SMC4-209ENST00000468653 SEC23BQ15437 767 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.53■□□□□ 0.44e-9■■■■■ 118.1
SMC4-209ENST00000468653 ENTPD8Q5MY95 495 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 DCAF12Q5T6F0 453 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 ZNF786Q8N393 782 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 ZSCAN1Q8NBB4 408 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 PMEPA1Q969W9 287 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 GTPBP3Q969Y2 492 aaKnown RBP17.53■□□□□ 0.4
SMC4-209ENST00000468653 ADIPOR1Q96A54 375 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 SPSB2Q99619 263 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 NIPSNAP1Q9BPW8 284 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 AKIRIN1Q9H9L7 192 aaPredicted RBP17.53■□□□□ 0.4
SMC4-209ENST00000468653 BATF3Q9NR55 127 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.53■□□□□ 0.4
SMC4-209ENST00000468653 MRTO4Q9UKD2 239 aaKnown RBP17.53■□□□□ 0.4
SMC4-209ENST00000468653 NXT1Q9UKK6 140 aaKnown RBP17.53■□□□□ 0.4
SMC4-209ENST00000468653 MYRFQ9Y2G1 1151 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 OR6C76A6NM76 312 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 GASTP01350 101 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 CBLP22681 906 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 ST3GAL3Q11203 375 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 TCF15Q12870 199 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 NPRL3Q12980 569 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 EBPQ15125 230 aaKnown RBP17.53■□□□□ 0.4
SMC4-209ENST00000468653 ZNF141Q15928 474 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 ZNF770Q6IQ21 691 aaPredicted RBP17.53■□□□□ 0.4
SMC4-209ENST00000468653 MRPL14Q6P1L8 145 aaKnown RBP17.53■□□□□ 0.4
SMC4-209ENST00000468653 PODNL1Q6PEZ8 512 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 THAP5Q7Z6K1 395 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 C9orf40Q8IXQ3 194 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 SLC7A13Q8TCU3 470 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 FUZQ9BT04 418 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 GRIP2Q9C0E4 1043 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 ING2Q9H160 280 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 ZNF696Q9H7X3 374 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 EVA1AQ9H8M9 152 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 MAN2C1Q9NTJ4 1040 aa17.53■□□□□ 0.4
SMC4-209ENST00000468653 WDR87Q6ZQQ6 2873 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 SH3PXD2BA1X283 911 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 C9J4A7 227 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 CYP7B1O75881 506 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 GKN3PP0CG01 181 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 RAB15P59190 212 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 IL18R1Q13478 541 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 TRAM2Q15035 370 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 ISXQ2M1V0 245 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 FAM199XQ6PEV8 388 aaPredicted RBP17.52■□□□□ 0.4
SMC4-209ENST00000468653 RAB11FIP2Q7L804 512 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 ADAMTS16Q8TE57 1224 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 DIO2Q92813 273 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 EFHD2Q96C19 240 aaPredicted RBP17.52■□□□□ 0.4
SMC4-209ENST00000468653 LMF1Q96S06 567 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 WDR54Q9H977 334 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 PARD6AQ9NPB6 346 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 MGAT4BQ9UQ53 548 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 NTNG1Q9Y2I2 539 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms