RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PTGES2Q9H7Z7 377 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 KLHL28Q9NXS3 571 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 C6orf203Q9P0P8 240 aaPredicted RBP22.04■■□□□ 1.12
PTCH1-210ENST00000468211 NDRG3Q9UGV2 375 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 BAIAP2L1Q9UHR4 511 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 MRTO4Q9UKD2 239 aaKnown RBP22.04■■□□□ 1.12
PTCH1-210ENST00000468211 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 IGLV3-32A0A0A0MS00 114 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 SLC28A1O00337 649 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 AZIN1O14977 448 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 NKX2-2O95096 273 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 CGAP01215 116 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 PRPS2P11908 318 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 HOXB4P17483 251 aaPredicted RBP22.03■■□□□ 1.12
PTCH1-210ENST00000468211 CCKARP32238 428 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 PRR5P85299 388 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 SLC18A2Q05940 514 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 RFTN2Q52LD8 501 aaPredicted RBP22.03■■□□□ 1.12
PTCH1-210ENST00000468211 ZAR1Q86SH2 424 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 OR4C3Q8NH37 302 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 FBXO30Q8TB52 745 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 GPR151Q8TDV0 419 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 GIMAP5Q96F15 307 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 NPAS1Q99742 590 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 CCT7Q99832 543 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 PIGQQ9BRB3 760 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 REEP4Q9H6H4 257 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 RNF122Q9H9V4 155 aa22.03■■□□□ 1.12
PTCH1-210ENST00000468211 NUP214P35658 2090 aaPredicted RBP22.02■■□□□ 1.12
PTCH1-210ENST00000468211 CASKO14936 926 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 RGS14O43566 566 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 KCNH1O95259 989 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 LINC00032P0C843 101 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 ACP2P11117 423 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 EFNA1P20827 205 aaPredicted RBP22.02■■□□□ 1.12
PTCH1-210ENST00000468211 HOXC12P31275 282 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 GPC1P35052 558 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 CD79BP40259 229 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 CLK3P49761 638 aaKnown RBP22.02■■□□□ 1.12
PTCH1-210ENST00000468211 PRKAG1P54619 331 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 PSMD4P55036 377 aaKnown RBP22.02■■□□□ 1.12
PTCH1-210ENST00000468211 C17orf67Q0P5P2 114 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 PON3Q15166 354 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 GLYR1Q49A26 553 aaPredicted RBP22.02■■□□□ 1.12
PTCH1-210ENST00000468211 GGNQ86UU5 652 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 ZNF764Q96H86 408 aaPredicted RBP22.02■■□□□ 1.12
PTCH1-210ENST00000468211 FAM111AQ96PZ2 611 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 KLHDC3Q9BQ90 382 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 C3orf14Q9HBI5 128 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 FBXO34Q9NWN3 711 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 VDAC3Q9Y277 283 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 DNAJC15Q9Y5T4 150 aa22.02■■□□□ 1.12
PTCH1-210ENST00000468211 DEFB108AA8MXU0 73 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 TMEM233B4DJY2 109 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 LINC01387J3KSC0 135 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 CTIFO43310 598 aaKnown RBP22.01■■□□□ 1.11
PTCH1-210ENST00000468211 EMC8O43402 210 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 TBX19O60806 448 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 AQP8O94778 261 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 FRKP42685 505 aaPredicted RBP22.01■■□□□ 1.11
PTCH1-210ENST00000468211 EEFSECP57772 596 aaKnown RBP22.01■■□□□ 1.11
PTCH1-210ENST00000468211 RPL38P63173 70 aaKnown RBP22.01■■□□□ 1.11
PTCH1-210ENST00000468211 PDE7AQ13946 482 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 GUSBP1Q15486 140 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 KANK2Q63ZY3 851 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 C22orf34Q6ZV56 151 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 METTL25Q8N6Q8 603 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 EIF1ADQ8N9N8 165 aaKnown RBP22.01■■□□□ 1.11
PTCH1-210ENST00000468211 ZNF610Q8N9Z0 462 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 SLC16A11Q8NCK7 471 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 NUP43Q8NFH3 380 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 SLC9A6Q92581 669 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 PPCDCQ96CD2 204 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 OTUB1Q96FW1 271 aaPredicted RBP22.01■■□□□ 1.11
PTCH1-210ENST00000468211 SH3BP4Q9P0V3 963 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 NTMQ9P121 344 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 EIF3LQ9Y262 564 aaKnown RBP22.01■■□□□ 1.11
PTCH1-210ENST00000468211 ZNF175Q9Y473 711 aa22.01■■□□□ 1.11
PTCH1-210ENST00000468211 TTC36A6NLP5 189 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 LSM1O15116 133 aaKnown RBP22■■□□□ 1.11
PTCH1-210ENST00000468211 OXSR1O95747 527 aaPredicted RBP22■■□□□ 1.11
PTCH1-210ENST00000468211 CHRNGP07510 517 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 UGT2B10P36537 528 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 SLC6A8P48029 635 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 PCYT1AP49585 367 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 KRTAP21-3Q3LHN1 58 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 FIGNL1Q6PIW4 674 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 RNF165Q6ZSG1 346 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 CXorf67Q86X51 503 aaPredicted RBP22■■□□□ 1.11
PTCH1-210ENST00000468211 GATSQ8NAP1 163 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 FAM110BQ8TC76 370 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 C16orf58Q96GQ5 468 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 GIMAP2Q9UG22 337 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 AP4B1Q9Y6B7 739 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 ARID1AO14497 2285 aa22■■□□□ 1.11
PTCH1-210ENST00000468211 RAI1Q7Z5J4 1906 aaPredicted RBP22■■□□□ 1.11
PTCH1-210ENST00000468211 ALG1L2C9J202 215 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 POU2F1P14859 743 aa21.99■■□□□ 1.11
PTCH1-210ENST00000468211 MANFP55145 182 aaKnown RBP21.99■■□□□ 1.11
PTCH1-210ENST00000468211 DUSP5Q16690 384 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms