RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 GALNT10Q86SR1 603 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 P3H2Q8IVL5 708 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 GSPT2Q8IYD1 628 aaKnown RBP18.95■□□□□ 0.62
COL9A3-207ENST00000467819 ZNF610Q8N9Z0 462 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 CCDC63Q8NA47 563 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 RHOXF2Q9BQY4 288 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 TXLNGYQ9BZA5 131 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 ELOVL5Q9NYP7 299 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 PROCRQ9UNN8 238 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 VDAC3Q9Y277 283 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 WBP11Q9Y2W2 641 aaKnown RBP18.95■□□□□ 0.62
COL9A3-207ENST00000467819 ABCA2Q9BZC7 2435 aa18.95■□□□□ 0.62
COL9A3-207ENST00000467819 H3BQF6 201 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 PDPK1O15530 556 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 ARHGEF9O43307 516 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 SMPD2O60906 423 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 CGAP01215 116 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 PCYT1AP49585 367 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 C17orf67Q0P5P2 114 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 Q5PR19 223 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 CLEC6AQ6EIG7 209 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 SZRD1Q7Z422 152 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 EXOC3L1Q86VI1 746 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 METTL25Q8N6Q8 603 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 GPR151Q8TDV0 419 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 SLC9A6Q92581 669 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 CIDECQ96AQ7 238 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-207ENST00000467819 C12orf65Q9H3J6 166 aaKnown RBP18.94■□□□□ 0.62
COL9A3-207ENST00000467819 ZNF395Q9H8N7 513 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-207ENST00000467819 CCL27Q9Y4X3 112 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 AP4B1Q9Y6B7 739 aa18.94■□□□□ 0.62
COL9A3-207ENST00000467819 UQCRHLA0A096LP55 91 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 C16orf97H3BN30 126 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 EIF1AYO14602 144 aaKnown RBP18.93■□□□□ 0.62
COL9A3-207ENST00000467819 PLIN3O60664 434 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 AQP8O94778 261 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 UROSP10746 265 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 CD8BP10966 210 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 PRPS2P11908 318 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 PRKAG1P54619 331 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 DNAJB13P59910 316 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 NAA20P61599 178 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 PRR5P85299 388 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 FGFBP1Q14512 234 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 EXOC3L2Q2M3D2 409 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 CCDC153Q494R4 210 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 GLYR1Q49A26 553 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-207ENST00000467819 ANKRD34AQ69YU3 496 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 CLEC9AQ6UXN8 241 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 GGNQ86UU5 652 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 CEP112Q8N8E3 955 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 FBXO30Q8TB52 745 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 PRRG4Q9BZD6 226 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 KLHL4Q9C0H6 718 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 FIS1Q9Y3D6 152 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 TLN2Q9Y4G6 2542 aa18.93■□□□□ 0.62
COL9A3-207ENST00000467819 IGLV3-32A0A0A0MS00 114 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 TTC36A6NLP5 189 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 AKAP10O43572 662 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 FCGR2AP12318 317 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 EIF1AXP47813 144 aaKnown RBP18.92■□□□□ 0.62
COL9A3-207ENST00000467819 KIAA0040Q15053 153 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 GUSBP1Q15486 140 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 ACKR1Q16570 336 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 ZNF385BQ569K4 471 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 SH2D5Q6ZV89 423 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 GATSQ8NAP1 163 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 PIGTQ969N2 578 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 HS3ST6Q96QI5 342 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 CCL19Q99731 98 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 LRTM1Q9HBL6 345 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 C1orf109Q9NX04 203 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 CLEC4AQ9UMR7 237 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 PRR14LQ5THK1 2151 aa18.92■□□□□ 0.62
COL9A3-207ENST00000467819 SMIM23A6NLE4 172 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 SLC28A1O00337 649 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 RGS14O43566 566 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 NKX2-2O95096 273 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 OXSR1O95747 527 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-207ENST00000467819 SHBGP04278 402 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 IFI6P09912 130 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 CPA3P15088 417 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 FPR1P21462 350 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 SLC6A8P48029 635 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 TMEM44Q2T9K0 475 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 VPS26BQ4G0F5 336 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 FAM214BQ7L5A3 538 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 CNPY4Q8N129 248 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 NUP43Q8NFH3 380 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 CLHC1Q8NHS4 586 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 ZFP28Q8NHY6 868 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 METTL2AQ96IZ6 378 aaKnown RBP18.91■□□□□ 0.62
COL9A3-207ENST00000467819 TSSK3Q96PN8 268 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 PIP5K1AQ99755 562 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 OXSMQ9NWU1 459 aa18.91■□□□□ 0.62
COL9A3-207ENST00000467819 FN1P02751 2386 aaKnown RBP18.91■□□□□ 0.62
COL9A3-207ENST00000467819 NUP214P35658 2090 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-207ENST00000467819 NDUFB5O43674 189 aa18.9■□□□□ 0.62
COL9A3-207ENST00000467819 PLGP00747 810 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-207ENST00000467819 OPN1LWP04000 364 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms