RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 ATP1A4Q13733 1029 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 EFR3AQ14156 821 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 ZSWIM7Q19AV6 140 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 MRPL2Q5T653 305 aaKnown RBP11.19□□□□□ -0.62
VPS16-206ENST00000466415 RNF220Q5VTB9 566 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 OR2T5Q6IEZ7 315 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 HMBOX1Q6NT76 420 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 PIWIL3Q7Z3Z3 882 aaKnown RBP11.19□□□□□ -0.62
VPS16-206ENST00000466415 OR2T29Q8NH02 315 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 OIT3Q8WWZ8 545 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 EME1Q96AY2 570 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 ADOQ96SZ5 270 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 EVA1AQ9H8M9 152 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 REEP1Q9H902 201 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 UBQLN4Q9NRR5 601 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 IL17BQ9UHF5 180 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 KLK13Q9UKR3 277 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 ABCG2Q9UNQ0 655 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 ENPP4Q9Y6X5 453 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 PTPRBP23467 1997 aa11.19□□□□□ -0.62
VPS16-206ENST00000466415 CENPVL1A0A0U1RR11 272 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 TRABD2BA6NFA1 517 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 TMEM229AB2RXF0 380 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 H3BNH8 94 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 CASQ2O14958 399 aaPredicted RBP11.18□□□□□ -0.62
VPS16-206ENST00000466415 ADAMDEC1O15204 470 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 TSPAN2O60636 221 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 ABCB7O75027 752 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 PPM1BO75688 479 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 DIRAS1O95057 198 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 CELA2AP08217 269 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 CYP4B1P13584 511 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 ZNF23P17027 643 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 PEX2P28328 305 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 CLK3P49761 638 aaKnown RBP11.18□□□□□ -0.62
VPS16-206ENST00000466415 RNF144AP50876 292 aaPredicted RBP11.18□□□□□ -0.62
VPS16-206ENST00000466415 ARHGDIAP52565 204 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 PNLIPRP2P54317 469 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 EEF1A1P68104 462 aaKnown RBP11.18□□□□□ -0.62
VPS16-206ENST00000466415 TGIF1Q15583 401 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 ZNF141Q15928 474 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 MAPK14Q16539 360 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 NRF1Q16656 503 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 TBC1D25Q3MII6 688 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 LPCAT4Q643R3 524 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 TCTN3Q6NUS6 607 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 VASH2Q86V25 355 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 RANBP3LQ86VV4 465 aaPredicted RBP11.18□□□□□ -0.62
VPS16-206ENST00000466415 CMIPQ8IY22 773 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 KBTBD2Q8IY47 623 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 SLC5A8Q8N695 610 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 TMEM102Q8N9M5 508 aaPredicted RBP11.18□□□□□ -0.62
VPS16-206ENST00000466415 ZSCAN1Q8NBB4 408 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 ZG16BQ96DA0 208 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 C7orf34Q96L11 122 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 ZNF300Q96RE9 604 aaPredicted RBP11.18□□□□□ -0.62
VPS16-206ENST00000466415 ARHGDIGQ99819 225 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 TACO1Q9BSH4 297 aaKnown RBP11.18□□□□□ -0.62
VPS16-206ENST00000466415 C9orf16Q9BUW7 83 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 AMBRA1Q9C0C7 1298 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 MYOTQ9UBF9 498 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 SLC35A3Q9Y2D2 325 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 SAMHD1Q9Y3Z3 626 aaKnown RBP11.18□□□□□ -0.62
VPS16-206ENST00000466415 TESMINQ9Y4I5 508 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 DTNAQ9Y4J8 743 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 NPFFR2Q9Y5X5 522 aa11.18□□□□□ -0.62
VPS16-206ENST00000466415 ZFHX2Q9C0A1 2572 aaPredicted RBP11.17□□□□□ -0.62
VPS16-206ENST00000466415 SERINC4A6NH21 518 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 OR6C70A6NIJ9 312 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 ICOSLGO75144 302 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 DNAJB5O75953 348 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 OR2J2O76002 312 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 OXSR1O95747 527 aaPredicted RBP11.17□□□□□ -0.62
VPS16-206ENST00000466415 SERPINA7P05543 415 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 ITGAMP11215 1152 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 RHCEP18577 417 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 RRM2P31350 389 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 YAP1P46937 504 aaKnown RBP11.17□□□□□ -0.62
VPS16-206ENST00000466415 FGFBP1Q14512 234 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 PUM1Q14671 1186 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS16-206ENST00000466415 LRRC36Q1X8D7 754 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 OGFRL1Q5TC84 451 aaPredicted RBP11.17□□□□□ -0.62
VPS16-206ENST00000466415 C16orf47Q6ZP98 133 aaPredicted RBP11.17□□□□□ -0.62
VPS16-206ENST00000466415 PLEKHM3Q6ZWE6 761 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 LACC1Q8IV20 430 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 CLIP4Q8N3C7 705 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 SLC15A4Q8N697 577 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 TMCO5AQ8N6Q1 288 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 AMER2Q8N7J2 671 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 NR4A3Q92570 626 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 TMCO6Q96DC7 493 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 FER1L6-AS2Q96M78 137 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 PIP5K1AQ99755 562 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 TBL1XR1Q9BZK7 514 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 KLHL4Q9C0H6 718 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 ZBTB20Q9HC78 741 aaPredicted RBP11.17□□□□□ -0.62
VPS16-206ENST00000466415 NDUFAF4Q9P032 175 aa11.17□□□□□ -0.62
VPS16-206ENST00000466415 CDHR4A6H8M9 788 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 CLDN24A6NM45 220 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 NPIPB9F8W1W9 429 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms