RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ENO3P13929 434 aaPredicted RBP5.15□□□□□ -1.59
NCL-208ENST00000466274 PTNP21246 168 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 ADRA1DP25100 572 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 MGAT1P26572 445 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 SRD5A2P31213 254 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 CDKN2BP42772 138 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 SLC1A1P43005 524 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 CDH15P55291 814 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 FBXW4P57775 412 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 RPS13P62277 151 aaKnown RBP5.15□□□□□ -1.59
NCL-208ENST00000466274 ZNF844Q08AG5 666 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 CDH17Q12864 832 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 SP140Q13342 867 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 RUNX2Q13950 521 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 CSHL1Q14406 222 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 SEMA3AQ14563 771 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 KCNJ11Q14654 390 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 PON3Q15166 354 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 CTU2Q2VPK5 515 aaKnown RBP5.15□□□□□ -1.59
NCL-208ENST00000466274 ACSBG2Q5FVE4 666 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 TOR1AIP1Q5JTV8 583 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 TSTD2Q5T7W7 516 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 DEPDC1Q5TB30 811 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 MRNIPQ6NTE8 343 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 ZNF544Q6NX49 715 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 TRIM40Q6P9F5 258 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 MFSD7Q6UXD7 560 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 RBMS3Q6XE24 437 aaKnown RBP5.15□□□□□ -1.59
NCL-208ENST00000466274 ZNF793Q6ZN11 406 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 H2AFVQ71UI9 128 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 ZNF534Q76KX8 674 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 OTUD6BQ8N6M0 293 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 TRIM58Q8NG06 486 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 TTLQ8NG68 377 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 SLC35B2Q8TB61 432 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 RDH11Q8TC12 318 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 SNX33Q8WV41 574 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 CTNNBL1Q8WYA6 563 aaPredicted RBP5.15□□□□□ -1.59
NCL-208ENST00000466274 FIG4Q92562 907 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 MUCL1Q96DR8 90 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 FBXL20Q96IG2 436 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 GMPPAQ96IJ6 420 aaPredicted RBP5.15□□□□□ -1.59
NCL-208ENST00000466274 AIF1LQ9BQI0 150 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 PINK1Q9BXM7 581 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 POTEKPQ9BYX7 375 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 WWTR1Q9GZV5 400 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 COPS7BQ9H9Q2 264 aaPredicted RBP5.15□□□□□ -1.59
NCL-208ENST00000466274 ZMAT3Q9HA38 289 aaKnown RBP5.15□□□□□ -1.59
NCL-208ENST00000466274 SERHLQ9NQF3 203 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 MOCS1Q9NZB8 636 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 KLHL42Q9P2K6 505 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 DKKL1Q9UK85 242 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 DTX4Q9Y2E6 619 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 MRPS18CQ9Y3D5 142 aaKnown RBP5.15□□□□□ -1.59
NCL-208ENST00000466274 MAD1L1Q9Y6D9 718 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 ROS1P08922 2347 aa5.15□□□□□ -1.59
NCL-208ENST00000466274 C2orf92A0A1B0GVN3 265 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 SHISA9B4DS77 424 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 ABCD4O14678 606 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 TIMM23O14925 209 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 RAMP1O60894 148 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 IGKV3-11P04433 115 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 LPLP06858 475 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 HIST1H2AGP0C0S8 130 aaPredicted RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 EGR2P11161 476 aaPredicted RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 SKILP12757 684 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 NPPBP16860 134 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 DDX5P17844 614 aaKnown RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 HIST1H2ADP20671 130 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 RPL22P35268 128 aaKnown RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 STT3AP46977 705 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 HNRNPFP52597 415 aaKnown RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 LIM2P55344 173 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 UBA52P62987 128 aaKnown RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 PLIN5Q00G26 463 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 ACVR1Q04771 509 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 TGM3Q08188 693 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 NAE1Q13564 534 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 RBBP5Q15291 538 aaKnown RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 GUSBP1Q15486 140 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 TAB1Q15750 504 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 SGCBQ16585 318 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 ALKBH5Q6P6C2 394 aaKnown RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 TMEM81Q6P7N7 255 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 DARS2Q6PI48 645 aaKnown RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 AGTRAPQ6RW13 159 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 SLC22A25Q6T423 547 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 TMEM108Q6UXF1 575 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 TBC1D1Q86TI0 1168 aaPredicted RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 KLHDC8BQ8IXV7 354 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 KLHDC8AQ8IYD2 350 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 UBQLNLQ8IYU4 475 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 BPIFB2Q8N4F0 458 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 GBP7Q8N8V2 638 aaPredicted RBP5.14□□□□□ -1.59
NCL-208ENST00000466274 SYT14Q8NB59 555 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 FNDC9Q8TBE3 224 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 FAM136AQ96C01 138 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 SNF8Q96H20 258 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 SERINC2Q96SA4 455 aa5.14□□□□□ -1.59
NCL-208ENST00000466274 PELOQ9BRX2 385 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms