RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ITGA2P17301 1181 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 NR4A1P22736 598 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 RRM2P31350 389 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 GGT2P36268 569 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 TSPAN7P41732 249 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 IGLV3-21P80748 117 aaPredicted RBP17.3■□□□□ 0.36
CAPN3-209ENST00000466222 DUSP8Q13202 625 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 OXA1LQ15070 435 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 IFI44LQ53G44 452 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 FHL5Q5TD97 284 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 TMEM64Q6YI46 380 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 CCDC80Q76M96 950 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 SLC44A2Q8IWA5 706 aaPredicted RBP17.3■□□□□ 0.36
CAPN3-209ENST00000466222 ENTHD1Q8IYW4 607 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 OR2L13Q8N349 312 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 OR6Q1Q8NGQ2 317 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 MYDGFQ969H8 173 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 OR51I1Q9H343 314 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 THSD1Q9NS62 852 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 AKAP7Q9P0M2 348 aaPredicted RBP17.3■□□□□ 0.36
CAPN3-209ENST00000466222 POFUT2Q9Y2G5 429 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 TNFRSF11BO00300 401 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 GCM2O75603 506 aaPredicted RBP17.29■□□□□ 0.36
CAPN3-209ENST00000466222 IFNA14P01570 189 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 ZGLP1P0C6A0 271 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 S1PR1P21453 382 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 PGDP52209 483 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 TUBA1BP68363 451 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 TBCEQ15813 527 aaPredicted RBP17.29■□□□□ 0.36
CAPN3-209ENST00000466222 GCNT6Q5T4J0 391 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 LANCL3Q6ZV70 420 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 TUBA1AQ71U36 451 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 BPHLQ86WA6 291 aaPredicted RBP17.29■□□□□ 0.36
CAPN3-209ENST00000466222 SLC30A8Q8IWU4 369 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 DEPDC4Q8N2C3 294 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 RIT1Q92963 219 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 SLC38A4Q969I6 547 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 ITFG2Q969R8 447 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 CTHRC1Q96CG8 243 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 DGAT2Q96PD7 388 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 ITPAQ9BY32 194 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 TMEM38AQ9H6F2 299 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 ADAP2Q9NPF8 381 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 MKKSQ9NPJ1 570 aaPredicted RBP17.29■□□□□ 0.36
CAPN3-209ENST00000466222 PNO1Q9NRX1 252 aaKnown RBP17.29■□□□□ 0.36
CAPN3-209ENST00000466222 ENOPH1Q9UHY7 261 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 PCDHGA6Q9Y5G7 932 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 IGKV3D-11A0A0A0MRZ8 115 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 TM4SF5O14894 197 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 JMJD7P0C870 316 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 SSTR4P31391 388 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 UGT2B10P36537 528 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 PRIM2P49643 509 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 CRYBA2P53672 197 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 TARDBPQ13148 414 aaKnown RBP eCLIP17.29■□□□□ 0.36
CAPN3-209ENST00000466222 NSDHLQ15738 373 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 C3orf38Q5JPI3 329 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 ZBTB46Q86UZ6 589 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 CCDC71Q8IV32 467 aaPredicted RBP17.29■□□□□ 0.36
CAPN3-209ENST00000466222 GALNT6Q8NCL4 622 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 NFKBIDQ8NI38 313 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 NDNFQ8TB73 568 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 APH1BQ8WW43 257 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 XAGE5Q8WWM1 108 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 SLC35G5Q96KT7 338 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 ALPK1Q96QP1 1244 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 PSD2Q9BQI7 771 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 C3orf14Q9HBI5 128 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 DAPK2Q9UIK4 370 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 LYVE1Q9Y5Y7 322 aa17.29■□□□□ 0.36
CAPN3-209ENST00000466222 COL27A1Q8IZC6 1860 aaPredicted RBP17.28■□□□□ 0.36
CAPN3-209ENST00000466222 PLD2O14939 933 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 CBX7O95931 251 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 DSTNP60981 165 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 PRR5P85299 388 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 ZNF267Q14586 743 aaPredicted RBP17.28■□□□□ 0.36
CAPN3-209ENST00000466222 MAPK11Q15759 364 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 DCAF12Q5T6F0 453 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 OVCH1Q7RTY7 1134 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 GALNT12Q8IXK2 581 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 VWA5B2Q8N398 1253 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 ZNF321PQ8N8H1 164 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 SLC16A11Q8NCK7 471 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 LIN37Q96GY3 246 aaPredicted RBP17.28■□□□□ 0.36
CAPN3-209ENST00000466222 SATB2Q9UPW6 733 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 RNF6Q9Y252 685 aa17.28■□□□□ 0.36
CAPN3-209ENST00000466222 NUP214P35658 2090 aaPredicted RBP17.28■□□□□ 0.36
CAPN3-209ENST00000466222 IGLV3-12A0A075B6K2 115 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 IGHV3-20A0A0C4DH32 117 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 TMEM229AB2RXF0 380 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 C9orf172C9J069 976 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 PRKNO60260 465 aaPredicted RBP17.27■□□□□ 0.36
CAPN3-209ENST00000466222 DKK1O94907 266 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 HBQ1P09105 142 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 TGFBR2P37173 567 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 PSMD7P51665 324 aa17.27■□□□□ 0.36
CAPN3-209ENST00000466222 EEF1A2Q05639 463 aaKnown RBP17.27■□□□□ 0.36
CAPN3-209ENST00000466222 SMN1Q16637 294 aaKnown RBP17.27■□□□□ 0.36
CAPN3-209ENST00000466222 ZNF630Q2M218 657 aaPredicted RBP17.27■□□□□ 0.36
CAPN3-209ENST00000466222 RPS26P11Q5JNZ5 115 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms