RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ETS2P15036 469 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 TCN1P20061 433 aaPredicted RBP10.23□□□□□ -0.77
VCP-204ENST00000466100 ATP6V1B2P21281 511 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 TBXA2RP21731 343 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 IL12BP29460 328 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 DCTP40126 519 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 RFX3P48380 749 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 ATP12AP54707 1039 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 PSMD4P55036 377 aaKnown RBP10.23□□□□□ -0.77
VCP-204ENST00000466100 KCNJ2P63252 427 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 HPCAP84074 193 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 MS4A2Q01362 244 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 PLAURQ03405 335 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 BNIP2Q12982 314 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 EFR3AQ14156 821 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 ZNF141Q15928 474 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 GRAMD1BQ3KR37 738 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 FLYWCH1Q4VC44 716 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 FNDC7Q5VTL7 733 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 APOOLQ6UXV4 268 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 LINC00696Q6ZRV3 163 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 NUP54Q7Z3B4 507 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 TMEM156Q8N614 296 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 GOLM1Q8NBJ4 401 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 TNIP2Q8NFZ5 429 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 OR10G3Q8NGC4 313 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 OR4C3Q8NH37 302 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 PAQR8Q8TEZ7 354 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 OIT3Q8WWZ8 545 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 TTC9Q92623 222 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 EXTL1Q92935 676 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 MCUR1Q96AQ8 359 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 TAMM41Q96BW9 452 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 ASB9Q96DX5 294 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 NODALQ96S42 347 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 SECISBP2Q96T21 854 aaKnown RBP10.23□□□□□ -0.77
VCP-204ENST00000466100 PCDHAC1Q9H158 963 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 MTHFD2LQ9H903 347 aaPredicted RBP10.23□□□□□ -0.77
VCP-204ENST00000466100 STMN3Q9NZ72 180 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 MRTO4Q9UKD2 239 aaKnown RBP10.23□□□□□ -0.77
VCP-204ENST00000466100 CNOT11Q9UKZ1 510 aaKnown RBP10.23□□□□□ -0.77
VCP-204ENST00000466100 SNX13Q9Y5W8 968 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 C5orf58C9J3I9 102 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 CXCR6O00574 342 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 OXSR1O95747 527 aaPredicted RBP10.22□□□□□ -0.77
VCP-204ENST00000466100 PDGFAP04085 211 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 THBS1P07996 1170 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 NCK1P16333 377 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 CD247P20963 164 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 ATP6V1C1P21283 382 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 AQP1P29972 269 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 KDELR2P33947 212 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 EVI2BP34910 448 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 KRT20P35900 424 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 CD96P40200 585 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 PTGDSP41222 190 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 CYB561P49447 251 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 GAS1P54826 345 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 POLE2P56282 527 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 DMTNQ08495 405 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 TRIM25Q14258 630 aaKnown RBP10.22□□□□□ -0.77
VCP-204ENST00000466100 GPR68Q15743 365 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 LINC00303Q3SY05 128 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 KLHL26Q53HC5 615 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 INTS11Q5TA45 600 aaKnown RBP10.22□□□□□ -0.77
VCP-204ENST00000466100 LCN8Q6JVE9 175 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 IL20RBQ6UXL0 311 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 MDGA2Q7Z553 956 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 HMGN2P46Q86SG4 172 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 PATL1Q86TB9 770 aaKnown RBP10.22□□□□□ -0.77
VCP-204ENST00000466100 CYP4Z2PQ8N1L4 340 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 POGLUT1Q8NBL1 392 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 MDS2Q8NDY4 140 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 OR52E4Q8NGH9 312 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 SPPL2AQ8TCT8 520 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 GRHL3Q8TE85 626 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 HAS2Q92819 552 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 CCDC124Q96CT7 223 aaKnown RBP10.22□□□□□ -0.77
VCP-204ENST00000466100 SGCZQ96LD1 299 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 CNTNAP3BQ96NU0 1288 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 SIGLEC12Q96PQ1 595 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 CNTNAP3Q9BZ76 1288 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 RTN4RQ9BZR6 473 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 MUC13Q9H3R2 512 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 GORASP2Q9H8Y8 452 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 PROK2Q9HC23 129 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 UBQLN4Q9NRR5 601 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 HPF1Q9NWY4 346 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 ANKRD10Q9NXR5 420 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 PLA2G3Q9NZ20 509 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 ACTR3BQ9P1U1 418 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 ABI3Q9P2A4 366 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 MAGEL2Q9UJ55 1249 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 ABCG2Q9UNQ0 655 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 POMPQ9Y244 141 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 CHST2Q9Y4C5 530 aa10.22□□□□□ -0.77
VCP-204ENST00000466100 A0A1W2PQD3 144 aa10.21□□□□□ -0.77
VCP-204ENST00000466100 OR5H15A6NDH6 313 aa10.21□□□□□ -0.77
VCP-204ENST00000466100 PRAMEF25A6NGN4 478 aa10.21□□□□□ -0.77
VCP-204ENST00000466100 B4DXG7 233 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms