RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TRBV5-3A0A0A0MS03 114 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 A0A1B0GTH9 108 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 A0A1W2PQD3 144 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 PRAMEF27A3QJZ7 478 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 SCO2O43819 266 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 SUSD5O60279 629 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 CDC40O60508 579 aaKnown RBP eCLIP18.52■□□□□ 0.56
SKA3-205ENST00000465471 HCN1O60741 890 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 SLC19A2O60779 497 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 CBR3O75828 277 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 ZIC2O95409 532 aaPredicted RBP18.52■□□□□ 0.56
SKA3-205ENST00000465471 KRT75O95678 551 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 OR12D1P0DN82 309 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 GDF1P27539 372 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 SEC24CP53992 1094 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 RBPJQ06330 500 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 SF3A3Q12874 501 aaKnown RBP eCLIP18.52■□□□□ 0.56
SKA3-205ENST00000465471 COX20Q5RI15 118 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 ARHGAP11AQ6P4F7 1023 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 SPPL2CQ8IUH8 684 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 MSRB3Q8IXL7 192 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 ZNF350Q9GZX5 532 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 TPT1P8Q9HAU6 139 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 SAR1AQ9NR31 198 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 EXD2Q9NVH0 621 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 SLC25A37Q9NYZ2 338 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 OSGIN2Q9Y236 505 aa18.52■□□□□ 0.56
SKA3-205ENST00000465471 AQP7O14520 342 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 ANP32DO95626 131 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 ANGPTL1O95841 491 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 ENDOUP21128 410 aaKnown RBP18.51■□□□□ 0.55
SKA3-205ENST00000465471 CLK3P49761 638 aaKnown RBP18.51■□□□□ 0.55
SKA3-205ENST00000465471 MARCH3Q86UD3 253 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 DPP10Q8N608 796 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 PRR7Q8TB68 274 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 RAB8BQ92930 207 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 AURKBQ96GD4 344 aaPredicted RBP18.51■□□□□ 0.55
SKA3-205ENST00000465471 TBL1XR1Q9BZK7 514 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 OR2B2Q9GZK3 357 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 NMUR2Q9GZQ4 415 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 HOXD1Q9GZZ0 328 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 SAP130Q9H0E3 1048 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 SLAMF8Q9P0V8 285 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 PPP4R1LQ9P1A2 415 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 FBXL2Q9UKC9 423 aa18.51■□□□□ 0.55
SKA3-205ENST00000465471 TRGV5A0A0B4J1U4 118 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 OR14I1A6ND48 311 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 ZNHIT1O43257 154 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 PDE9AO76083 593 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 ATP6V1C1P21283 382 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 DRD4P21917 467 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 DCTP40126 519 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 ANXA11P50995 505 aaKnown RBP18.5■□□□□ 0.55
SKA3-205ENST00000465471 UBAP2LQ14157 1087 aaKnown RBP18.5■□□□□ 0.55
SKA3-205ENST00000465471 KLHL26Q53HC5 615 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.5■□□□□ 0.55
SKA3-205ENST00000465471 ATAD3BQ5T9A4 648 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 C16orf62Q7Z3J2 963 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 RETREG3Q86VR2 466 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 OR2M3Q8NG83 312 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 NEIL3Q8TAT5 605 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 PNPT1Q8TCS8 783 aaKnown RBP18.5■□□□□ 0.55
SKA3-205ENST00000465471 XAGE5Q8WWM1 108 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 RELTQ969Z4 430 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 SLC6A15Q9H2J7 730 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 POLE3Q9NRF9 147 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 SDHAF3Q9NRP4 125 aa18.5■□□□□ 0.55
SKA3-205ENST00000465471 LEF1Q9UJU2 399 aaPredicted RBP18.5■□□□□ 0.55
SKA3-205ENST00000465471 MRPS18CQ9Y3D5 142 aaKnown RBP18.5■□□□□ 0.55
SKA3-205ENST00000465471 LRRK2Q5S007 2527 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 KIAA0513O60268 411 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 FCMRO60667 390 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 STX11O75558 287 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 SRD5A2P31213 254 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 PTGS2P35354 604 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 CA7P43166 264 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 ATP12AP54707 1039 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 C17orf67Q0P5P2 114 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 CD226Q15762 336 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 ZNF141Q15928 474 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 FLYWCH1Q4VC44 716 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 C4orf17Q53FE4 359 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 OR5M10Q6IEU7 315 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 TYW3Q6IPR3 259 aaKnown RBP18.49■□□□□ 0.55
SKA3-205ENST00000465471 DLEU7Q6UYE1 221 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 FRRS1Q6ZNA5 592 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 SPATA21Q7Z572 469 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 FAM83FQ8NEG4 500 aaPredicted RBP18.49■□□□□ 0.55
SKA3-205ENST00000465471 FAM57AQ8TBR7 257 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 DUSP19Q8WTR2 217 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 OIT3Q8WWZ8 545 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 ROPN1LQ96C74 230 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 HHATLQ9HCP6 504 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 VAPAQ9P0L0 249 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 SPRR3Q9UBC9 169 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 KCNE5Q9UJ90 142 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 LIPT1Q9Y234 373 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 PCNX3Q9H6A9 2034 aa18.49■□□□□ 0.55
SKA3-205ENST00000465471 NPIPA5A0A0B4J1W7 369 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 GMNCA6NCL1 334 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms