RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 OR51I1Q9H343 314 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 BCL2L10Q9HD36 194 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 DDX18Q9NVP1 670 aaKnown RBP12.81□□□□□ -0.36
HDAC6-215ENST00000465457 NAALAD2Q9Y3Q0 740 aa12.81□□□□□ -0.36
HDAC6-215ENST00000465457 A0A087WV62 115 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 A0A0G2JPF8 293 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 FITM1A5D6W6 292 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 HNRNPCL2B2RXH8 293 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 HNRNPCL3B7ZW38 293 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 C9J4A7 227 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 ZNF749O43361 778 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 HCRTR1O43613 425 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 JRKO75564 520 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 PRKRAO75569 313 aaKnown RBP12.8□□□□□ -0.36
HDAC6-215ENST00000465457 PGM3O95394 542 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 NSA2O95478 260 aaKnown RBP12.8□□□□□ -0.36
HDAC6-215ENST00000465457 GPR75O95800 540 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 IFNW1P05000 195 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 BCHEP06276 602 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 UMODP07911 640 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 HNRNPCL4P0DMR1 293 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 NR2F1P10589 423 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 RNH1P13489 461 aaKnown RBP12.8□□□□□ -0.36
HDAC6-215ENST00000465457 CPMP14384 443 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 FEN1P39748 380 aaKnown RBP12.8□□□□□ -0.36
HDAC6-215ENST00000465457 XKP51811 444 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 VLDLRP98155 873 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 IL18R1Q13478 541 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 GRM7Q14831 915 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 ZNF169Q14929 603 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-215ENST00000465457 OTUD3Q5T2D3 398 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-215ENST00000465457 MLIPQ5VWP3 458 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 ZCCHC12Q6PEW1 402 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 TMEM107Q6UX40 140 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 OR2L13Q8N349 312 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 ZNF555Q8NEP9 628 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 NUP43Q8NFH3 380 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 ZNF675Q8TD23 568 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 PROX1Q92786 737 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 ACTRT3Q9BYD9 372 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 YTHDF1Q9BYJ9 559 aaKnown RBP12.8□□□□□ -0.36
HDAC6-215ENST00000465457 FAM60AQ9NP50 221 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 EXD2Q9NVH0 621 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 TRPC4Q9UBN4 977 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 SH3BGRL2Q9UJC5 107 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 ABCG2Q9UNQ0 655 aa12.8□□□□□ -0.36
HDAC6-215ENST00000465457 SAMHD1Q9Y3Z3 626 aaKnown RBP12.8□□□□□ -0.36
HDAC6-215ENST00000465457 FAM32AQ9Y421 112 aaKnown RBP12.8□□□□□ -0.36
HDAC6-215ENST00000465457 CPAMD8Q8IZJ3 1885 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 MAP1AP78559 2803 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-215ENST00000465457 A8MVJ9 347 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 hCG_2039718K7EN88 272 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 CYR61O00622 381 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 DLGAP1O14490 977 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 B4GALT2O60909 372 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 HMGN2P05204 90 aaKnown RBP12.79□□□□□ -0.36
HDAC6-215ENST00000465457 MSL3P1P0C860 447 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 FOLR3P41439 243 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 MC3RP41968 323 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 AVPR1BP47901 424 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 SOX8P57073 446 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 RPS26P62854 115 aaKnown RBP12.79□□□□□ -0.36
HDAC6-215ENST00000465457 HPCAP84074 193 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 BIKQ13323 160 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 SSPNQ14714 243 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 DEFB110Q30KQ9 67 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 YOD1Q5VVQ6 348 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-215ENST00000465457 FAM180BQ6P0A1 224 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 GALNT10Q86SR1 603 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 CYP4Z1Q86W10 505 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 ZNF595Q8IYB9 648 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 OR9A2Q8NGT5 310 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 CYGBQ8WWM9 190 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 NR4A3Q92570 626 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 MVB12AQ96EY5 273 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 TRNT1Q96Q11 434 aaKnown RBP12.79□□□□□ -0.36
HDAC6-215ENST00000465457 TAAR6Q96RI8 345 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 CSF3RQ99062 836 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 MESP1Q9BRJ9 268 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 PELOQ9BRX2 385 aaKnown RBP12.79□□□□□ -0.36
HDAC6-215ENST00000465457 CACYBPQ9HB71 228 aaKnown RBP12.79□□□□□ -0.36
HDAC6-215ENST00000465457 FANCEQ9HB96 536 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 FBXL4Q9UKA2 621 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 MYRFQ9Y2G1 1151 aa12.79□□□□□ -0.36
HDAC6-215ENST00000465457 GPC6Q9Y625 555 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-215ENST00000465457 TRGV8A0A0C4DH27 118 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 ARRDC5A6NEK1 342 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 WASHC1A8K0Z3 465 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 H0YIG0 161 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 PEX12O00623 359 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 PLOD3O60568 738 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 MFN2O95140 757 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 AK1P00568 194 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 C8orf89P0DMQ9 161 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 OR12D1P0DN82 309 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 RHCEP18577 417 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 GABRA4P48169 554 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 CASP9P55211 416 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 SMIM11AP58511 58 aa12.78□□□□□ -0.36
HDAC6-215ENST00000465457 ADARB1P78563 741 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms