RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 NTMQ9P121 344 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 URADA6NGE7 173 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 IDH3BO43837 385 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 SLC2A10O95528 541 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 EML2O95834 649 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 PAICSP22234 425 aaKnown RBP17.09■□□□□ 0.33
SYNE4-204ENST00000465425 SSTR4P31391 388 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 SIM1P81133 766 aaPredicted RBP17.09■□□□□ 0.33
SYNE4-204ENST00000465425 MADCAM1Q13477 382 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 ZNF791Q3KP31 576 aaPredicted RBP17.09■□□□□ 0.33
SYNE4-204ENST00000465425 ARHGAP11BQ3KRB8 267 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 PPP2R2DQ66LE6 453 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 UTS2BQ765I0 119 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 GALNT12Q8IXK2 581 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 OR2L13Q8N349 312 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 ATP6V1C2Q8NEY4 427 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 BBS1Q8NFJ9 593 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 NEIL3Q8TAT5 605 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 SAMD8Q96LT4 415 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 SERINC2Q96SA4 455 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 TMEM106CQ9BVX2 250 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 TNFRSF10DQ9UBN6 386 aa17.09■□□□□ 0.33
SYNE4-204ENST00000465425 TRBV23OR9-2A0A075B6M9 112 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 POM121BA6NF01 834 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 CDC42EP2O14613 210 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 KLF4O43474 513 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 B3GALT2O43825 422 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 KIR2DL1P43626 348 aaPredicted RBP17.08■□□□□ 0.33
SYNE4-204ENST00000465425 RPS5P46782 204 aaKnown RBP17.08■□□□□ 0.33
SYNE4-204ENST00000465425 CLDN2P57739 230 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 DUSP5Q16690 384 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 ZNF628Q5EBL2 1059 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 SDE2Q6IQ49 451 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 MARCH9Q86YJ5 346 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 OR52N1Q8NH53 320 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 OR2B2Q9GZK3 357 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 C11orf54Q9H0W9 315 aaPredicted RBP17.08■□□□□ 0.33
SYNE4-204ENST00000465425 PTGFRNQ9P2B2 879 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 KLF15Q9UIH9 416 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 CBLCQ9ULV8 474 aa17.08■□□□□ 0.33
SYNE4-204ENST00000465425 EXOGQ9Y2C4 368 aaKnown RBP17.08■□□□□ 0.33
SYNE4-204ENST00000465425 SCN3AQ9NY46 2000 aa17.08■□□□□ 0.32
SYNE4-204ENST00000465425 TRANK1O15050 2925 aa17.08■□□□□ 0.32
SYNE4-204ENST00000465425 DUSP8Q13202 625 aa17.08■□□□□ 0.32
SYNE4-204ENST00000465425 ZFP69Q49AA0 526 aa17.08■□□□□ 0.32
SYNE4-204ENST00000465425 CCNJQ5T5M9 372 aa17.08■□□□□ 0.32
SYNE4-204ENST00000465425 CXXC5Q7LFL8 322 aaKnown RBP17.08■□□□□ 0.32
SYNE4-204ENST00000465425 CPOQ8IVL8 374 aa17.08■□□□□ 0.32
SYNE4-204ENST00000465425 SIMC1Q8NDZ2 872 aa17.08■□□□□ 0.32
SYNE4-204ENST00000465425 OR52L1Q8NGH7 329 aa17.08■□□□□ 0.32
SYNE4-204ENST00000465425 SPRYD4Q8WW59 207 aaPredicted RBP17.08■□□□□ 0.32
SYNE4-204ENST00000465425 TP63Q9H3D4 680 aaPredicted RBP17.08■□□□□ 0.32
SYNE4-204ENST00000465425 MARCH7Q9H992 704 aa17.08■□□□□ 0.32
SYNE4-204ENST00000465425 N6AMT1Q9Y5N5 214 aa17.08■□□□□ 0.32
SYNE4-204ENST00000465425 FAM183AA6NL82 134 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 K7EQS6 105 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 GABRPO00591 440 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 IGHA1P01876 353 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 ZNF10P21506 573 aaPredicted RBP17.07■□□□□ 0.32
SYNE4-204ENST00000465425 PPP2CBP62714 309 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 PPP2CAP67775 309 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 ACSM1Q08AH1 577 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 SLC35F1Q5T1Q4 408 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 TRIQKQ629K1 86 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 FBXO42Q6P3S6 717 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 PRR23CQ6ZRP0 262 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 OR51G2Q8NGK0 314 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 ENKURQ8TC29 256 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 NACC2Q96BF6 587 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 RIPOR3Q96MK2 946 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 SDF2Q99470 211 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 HINT3Q9NQE9 182 aaKnown RBP17.07■□□□□ 0.32
SYNE4-204ENST00000465425 DZANK1Q9NVP4 752 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 KCMF1Q9P0J7 381 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 ATG2BQ96BY7 2078 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 COQ9O75208 318 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 SLC2A2P11168 524 aaPredicted RBP17.07■□□□□ 0.32
SYNE4-204ENST00000465425 NTSR1P30989 418 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 RCVRNP35243 200 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 ACTR1BP42025 376 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 TNFRSF4P43489 277 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 ACTR1AP61163 376 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 SNRPNP63162 240 aaKnown RBP17.07■□□□□ 0.32
SYNE4-204ENST00000465425 MRPS15P82914 257 aaKnown RBP17.07■□□□□ 0.32
SYNE4-204ENST00000465425 ZNF155Q12901 538 aaPredicted RBP17.07■□□□□ 0.32
SYNE4-204ENST00000465425 KIR2DS3Q14952 304 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 NDUFA5Q16718 116 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 LCN1P1Q5VSP4 162 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 FAM109BQ6ICB4 259 aaPredicted RBP17.07■□□□□ 0.32
SYNE4-204ENST00000465425 KLBQ86Z14 1044 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 GID4Q8IVV7 300 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 SLC7A5P1Q8MH63 180 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 UBE2J2Q8N2K1 259 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 VWA5B2Q8N398 1253 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 ARIH2OSQ8N7S6 290 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 C19orf18Q8NEA5 215 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 OR1E3Q8WZA6 343 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 DPH1Q9BZG8 443 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 UBQLN3Q9H347 655 aa17.07■□□□□ 0.32
SYNE4-204ENST00000465425 ADAP2Q9NPF8 381 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms