RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 MAP3K8P41279 467 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 SMSP52788 366 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 DSTNP60981 165 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 ALDH6A1Q02252 535 aaKnown RBP16.01■□□□□ 0.15
CPSF4-209ENST00000465132 RGNQ15493 299 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 TBCELQ5QJ74 424 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 Q6ZPB1 254 aaPredicted RBP16.01■□□□□ 0.15
CPSF4-209ENST00000465132 SPPL2CQ8IUH8 684 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 CYP4Z2PQ8N1L4 340 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 ZNF527Q8NB42 609 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 SLC16A11Q8NCK7 471 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 XAGE5Q8WWM1 108 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 C16orf58Q96GQ5 468 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 LURAP1Q96LR2 239 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 COL21A1Q96P44 957 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 TRIM8Q9BZR9 551 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 TSPAN10Q9H1Z9 355 aaPredicted RBP16.01■□□□□ 0.15
CPSF4-209ENST00000465132 TRIM45Q9H8W5 580 aaPredicted RBP16.01■□□□□ 0.15
CPSF4-209ENST00000465132 CNIH4Q9P003 139 aa16.01■□□□□ 0.15
CPSF4-209ENST00000465132 TMEM200CA6NKL6 621 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 C5orf58C9J3I9 102 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 NPIPA5E9PKD4 350 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 EBAG9O00559 213 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 ACP2P11117 423 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 HPGDP15428 266 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 MAN2A2P49641 1150 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 CORO7P57737 925 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 RBBP4Q09028 425 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 DUSP5Q16690 384 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 CPEB4Q17RY0 729 aaKnown RBP eCLIP16■□□□□ 0.15
CPSF4-209ENST00000465132 SPATS1Q496A3 300 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 EXOSC6Q5RKV6 272 aaKnown RBP16■□□□□ 0.15
CPSF4-209ENST00000465132 NANOGP8Q6NSW7 305 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 SERPINA11Q86U17 422 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 TMEM178AQ8NBL3 297 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 SIMC1Q8NDZ2 872 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 TNIP2Q8NFZ5 429 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 DIO2Q92813 273 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 OMA1Q96E52 524 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 SLC35A4Q96G79 324 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 FRMD6Q96NE9 622 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 TRNT1Q96Q11 434 aaKnown RBP16■□□□□ 0.15
CPSF4-209ENST00000465132 YIPF4Q9BSR8 244 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 NANOGQ9H9S0 305 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 SLC25A37Q9NYZ2 338 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 LRFN1Q9P244 771 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 NPIPA1Q9UND3 350 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 DTX4Q9Y2E6 619 aa16■□□□□ 0.15
CPSF4-209ENST00000465132 STX11O75558 287 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 NEURL1O76050 574 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 IL33O95760 270 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 P04436 131 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 SP1P08047 785 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 OR12D1P0DN82 309 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 NR2F1P10589 423 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 HOXB9P17482 250 aaPredicted RBP15.99■□□□□ 0.15
CPSF4-209ENST00000465132 SOX3P41225 446 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 CRISP3P54108 245 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 SNTA1Q13424 505 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 CDSNQ15517 529 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 NNATQ16517 81 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 NTRK2Q16620 822 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 CYP51A1Q16850 503 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 ARHGAP11BQ3KRB8 267 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 DCST2Q5T1A1 773 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.99■□□□□ 0.15
CPSF4-209ENST00000465132 GCNT6Q5T4J0 391 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 PRAMEF8Q5VWM4 474 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 PRAMEF7Q5VXH5 474 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 TNFAIP8L2Q6P589 184 aaPredicted RBP15.99■□□□□ 0.15
CPSF4-209ENST00000465132 ERICH5Q6P6B1 374 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 IL20RBQ6UXL0 311 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 GALNTL5Q7Z4T8 443 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 SIAH3Q8IW03 269 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 ZNF295-AS1Q8N0V1 137 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 CLEC4FQ8N1N0 589 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 ARHGAP24Q8N264 748 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 FAM98AQ8NCA5 519 aaKnown RBP15.99■□□□□ 0.15
CPSF4-209ENST00000465132 CHDHQ8NE62 594 aaPredicted RBP15.99■□□□□ 0.15
CPSF4-209ENST00000465132 PNPT1Q8TCS8 783 aaKnown RBP15.99■□□□□ 0.15
CPSF4-209ENST00000465132 CDS1Q92903 461 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 TMBIM1Q969X1 311 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 RMND5BQ96G75 393 aaPredicted RBP15.99■□□□□ 0.15
CPSF4-209ENST00000465132 CPPED1Q9BRF8 314 aaPredicted RBP15.99■□□□□ 0.15
CPSF4-209ENST00000465132 C1orf21Q9H246 121 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 SPAG4Q9NPE6 437 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 SDHAF3Q9NRP4 125 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 ARL8BQ9NVJ2 186 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 SLAMF8Q9P0V8 285 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 MEMO1Q9Y316 297 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 PDZD2O15018 2839 aa15.99■□□□□ 0.15
CPSF4-209ENST00000465132 H3BNH8 94 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 HMGN4O00479 90 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 KCNK2O95069 426 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 NADKO95544 446 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-209ENST00000465132 BMP2P12643 396 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 SLC6A2P23975 617 aa15.98■□□□□ 0.15
CPSF4-209ENST00000465132 RPS26P62854 115 aaKnown RBP15.98■□□□□ 0.15
CPSF4-209ENST00000465132 GABPB1Q06547 395 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-209ENST00000465132 ZNF791Q3KP31 576 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms