RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PCDH17O14917 1159 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 CLGNO14967 610 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 AZIN1O14977 448 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 PRKRAO75569 313 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 RSL1D1O76021 490 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 CLDN9O95484 217 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 IGHEP01854 428 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 C1QCP02747 245 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 GBAP04062 536 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 RPN2P04844 631 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ALPPP05187 535 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 KLK3P07288 261 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 VIMP08670 466 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ALDOCP09972 364 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 NEFHP12036 1026 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 CD99P14209 185 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 AMD1P17707 334 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ITGAXP20702 1163 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 AGAP20933 346 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ARL1P40616 181 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 HNF4AP41235 474 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 CCNG1P51959 295 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 AQP5P55064 265 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 RPS13P62277 151 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 RAE1P78406 368 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 CFHR3Q02985 330 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 GALNT1Q10472 559 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 TBL3Q12788 808 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ATP1A4Q13733 1029 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ARHGAP19Q14CB8 494 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 KIAA0040Q15053 153 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 SLC5A12Q1EHB4 618 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 GGTA1PQ4G0N0 100 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 VWA2Q5GFL6 755 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 DCAF10Q5QP82 559 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 FAM69BQ5VUD6 431 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ATG9BQ674R7 924 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 GRHL2Q6ISB3 625 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 RPUSD3Q6P087 351 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 TTC23LQ6PF05 361 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF793Q6ZN11 406 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 RNF44Q7L0R7 432 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ADCK2Q7Z695 626 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 FJX1Q86VR8 437 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 C17orf64Q86WR6 236 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 OOSP2Q86WS3 158 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 DSELQ8IZU8 1212 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 TCAIMQ8N3R3 496 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 DNAJC22Q8N4W6 341 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ARFGAP2Q8N6H7 521 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ENDOVQ8N8Q3 282 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 HUS1BQ8NHY5 278 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 PPP4R1Q8TF05 950 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF473Q8WTR7 871 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 IGFBPL1Q8WX77 278 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 TM9SF4Q92544 642 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 CHMP6Q96FZ7 201 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 CNDP1Q96KN2 507 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 TEX37Q96LM6 180 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 FER1L6-AS2Q96M78 137 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 IP6K3Q96PC2 410 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 OR2A5Q96R48 311 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 F2RL3Q96RI0 385 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 MTERF1Q99551 399 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ELAC2Q9BQ52 826 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 TMEM120AQ9BXJ8 343 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 MRPL1Q9BYD6 325 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ILKAPQ9H0C8 392 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 CXXC4Q9H2H0 198 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 OR51B5Q9H339 312 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ACTR8Q9H981 624 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 MCCC2Q9HCC0 563 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 MRPS30Q9NP92 439 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 THAP1Q9NVV9 213 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 HEY2Q9UBP5 337 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 EXO1Q9UQ84 846 aaKnown RBP3.35□□□□□ -1.87
SCFD1-204ENST00000463622 DLGAP4Q9Y2H0 992 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 ANGPTL3Q9Y5C1 460 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 USH1CQ9Y6N9 552 aa3.35□□□□□ -1.87
SCFD1-204ENST00000463622 GMNCA6NCL1 334 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 OR2W5A6NFC9 320 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF860A6NHJ4 632 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 C2orf74A8MZ97 194 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 H0YGG7 62 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 H0YIV9 168 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 M0R3H8 397 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 LSM1O15116 133 aaKnown RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 KCNAB3O43448 404 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 FRS3O43559 492 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 OR1F1O43749 312 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 SNX3O60493 162 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 PEX11AO75192 247 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 EEDO75530 441 aaKnown RBP3.34□□□□□ -1.87
SCFD1-204ENST00000463622 JRKO75564 520 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 SCRG1O75711 98 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 OTCP00480 354 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 FGF4P08620 206 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 PCNAP12004 261 aa3.34□□□□□ -1.87
SCFD1-204ENST00000463622 CDH3P22223 829 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms