RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 NUDT22Q9BRQ3 303 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 TVP23BQ9NYZ1 205 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 ERVK-19Q9WJR5 959 aa11.89□□□□□ -0.51
VAPB-203ENST00000463370 CDHR4A6H8M9 788 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 M0R082 166 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 OR2B3O76000 313 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 PTHP01270 115 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 DBIP07108 87 aaKnown RBP11.88□□□□□ -0.51
VAPB-203ENST00000463370 GLB1P16278 677 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 TGFBR2P37173 567 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 LIPAP38571 399 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 HSD11B2P80365 405 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 TEKQ02763 1124 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 COX10Q12887 443 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 GINS1Q14691 196 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 TCTE1Q5JU00 501 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 UBE2UQ5VVX9 321 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 TMPRSS9Q7Z410 1059 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 ARHGAP22Q7Z5H3 698 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 NRMQ8IXM6 262 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 SVOPQ8N4V2 548 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 RPL3LQ92901 407 aaKnown RBP11.88□□□□□ -0.51
VAPB-203ENST00000463370 DGAT2Q96PD7 388 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 LMF2Q9BU23 707 aaKnown RBP11.88□□□□□ -0.51
VAPB-203ENST00000463370 CHRNA10Q9GZZ6 450 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 GPN2Q9H9Y4 310 aaPredicted RBP11.88□□□□□ -0.51
VAPB-203ENST00000463370 CUTCQ9NTM9 273 aa11.88□□□□□ -0.51
VAPB-203ENST00000463370 MRPS33Q9Y291 106 aaKnown RBP11.88□□□□□ -0.51
VAPB-203ENST00000463370 CLDN4O14493 209 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 MRPS14O60783 128 aaKnown RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 NOL3O60936 208 aaKnown RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 COQ9O75208 318 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CLPSP04118 112 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 IFI6P09912 130 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 TGFBR1P36897 503 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 GIPRP48546 466 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 MLLT10P55197 1068 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 SNRPGP62308 76 aaKnown RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 SKP1P63208 163 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 ALDH6A1Q02252 535 aaKnown RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 GRM7Q14831 915 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 FLYWCH1Q4VC44 716 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CLEC12AQ5QGZ9 265 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 PDZK1Q5T2W1 519 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 STX19Q8N4C7 294 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 AMER2Q8N7J2 671 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 ZNF321PQ8N8H1 164 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 RCBTB1Q8NDN9 531 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CNOT9Q92600 299 aaKnown RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 MYDGFQ969H8 173 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 LMF1Q96S06 567 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CD180Q99467 661 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 PRSS27Q9BQR3 290 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 TRIM45Q9H8W5 580 aaPredicted RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 SLC25A19Q9HC21 320 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 LANCL2Q9NS86 450 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 IL20RAQ9UHF4 553 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CABIN1Q9Y6J0 2220 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 CDC42EP2O14613 210 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 ZNF749O43361 778 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 TLX2O43763 284 aaPredicted RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 DUX1O43812 170 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 GABARAPO95166 117 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 OR5F1O95221 314 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 LYPD3O95274 346 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 IFNA16P05015 189 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 ADORA3P0DMS8 318 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CT45A8P0DMV1 189 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CT45A9P0DMV2 189 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 FUT1P19526 365 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 SLC15A1P46059 708 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CDK5Q00535 292 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CT45A2Q5DJT8 189 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 LYSMD4Q5XG99 296 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CASP12Q6UXS9 341 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 ZNF614Q8N883 585 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 C16orf52Q8NHV5 167 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 MAFAQ8NHW3 353 aaPredicted RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 ACOT11Q8WXI4 607 aaPredicted RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 YIPF2Q9BWQ6 316 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 ERVMER34-1Q9H9K5 563 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 CACYBPQ9HB71 228 aaKnown RBP11.87□□□□□ -0.51
VAPB-203ENST00000463370 CLN6Q9NWW5 311 aa11.87□□□□□ -0.51
VAPB-203ENST00000463370 A0A1B0GVG6 124 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 H0YIG0 161 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 MPZL2O60487 215 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 ST13P50502 369 aaKnown RBP11.86□□□□□ -0.51
VAPB-203ENST00000463370 SH3BGRP55822 239 aaPredicted RBP11.86□□□□□ -0.51
VAPB-203ENST00000463370 HSD17B7P56937 341 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 FOXL2P58012 376 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 VBP1P61758 197 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 TSPAN31Q12999 210 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 IRF3Q14653 427 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 OR1Q1Q15612 314 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 TBCEQ15813 527 aaPredicted RBP11.86□□□□□ -0.51
VAPB-203ENST00000463370 DECR1Q16698 335 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 EIPR1Q53HC9 387 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 PLXDC1Q8IUK5 500 aa11.86□□□□□ -0.51
VAPB-203ENST00000463370 LINC00471Q8N535 108 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms