RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CHRNGP07510 517 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 LINC00032P0C843 101 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 BCKDHAP12694 445 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 DDX5P17844 614 aaKnown RBP8.27□□□□□ -1.09
BRCA1-207ENST00000461798 HK1P19367 917 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 MANFP55145 182 aaKnown RBP8.27□□□□□ -1.09
BRCA1-207ENST00000461798 VSNL1P62760 191 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.27□□□□□ -1.09
BRCA1-207ENST00000461798 XKR7Q5GH72 579 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 SH2D4BQ5SQS7 431 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 ANKRD26P1Q6NSI1 321 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 MFSD12Q6NUT3 480 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 WDR93Q6P2C0 686 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 EMBQ6PCB8 327 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 APOOLQ6UXV4 268 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 R3HCC1LQ7Z5L2 792 aaKnown RBP8.27□□□□□ -1.09
BRCA1-207ENST00000461798 MARCH3Q86UD3 253 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 CDC20BQ86Y33 519 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 MEIOBQ8N635 442 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 NATD1Q8N6N6 113 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 NUP43Q8NFH3 380 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 TCP10LQ8TDR4 215 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 AENQ8WTP8 325 aaKnown RBP8.27□□□□□ -1.09
BRCA1-207ENST00000461798 TWIST2Q8WVJ9 160 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 NRGNQ92686 78 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 GFM2Q969S9 779 aaKnown RBP8.27□□□□□ -1.09
BRCA1-207ENST00000461798 CIDECQ96AQ7 238 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-207ENST00000461798 INTS12Q96CB8 462 aaKnown RBP8.27□□□□□ -1.09
BRCA1-207ENST00000461798 C1GALT1C1Q96EU7 318 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 PPP3R2Q96LZ3 170 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 DACH2Q96NX9 599 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 TSSK3Q96PN8 268 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 FAM111AQ96PZ2 611 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 GPATCH1Q9BRR8 931 aaKnown RBP8.27□□□□□ -1.09
BRCA1-207ENST00000461798 MED11Q9P086 117 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 SH3BP4Q9P0V3 963 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 SLC17A7Q9P2U7 560 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 ST6GALNAC2Q9UJ37 374 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 PACSIN3Q9UKS6 424 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 RPH3AQ9Y2J0 694 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-207ENST00000461798 ZNF337Q9Y3M9 751 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 ZNF175Q9Y473 711 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 MTORP42345 2549 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 A0A087WZY1 265 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 A0A1W2PNV4 684 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 OR2M5A3KFT3 312 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 TMEM114B3SHH9 223 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 TMEM233B4DJY2 109 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 EEF1E1-BLOC1S5C9J1V9 151 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 MSTNO14793 375 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 PIP5K1BO14986 540 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 EEF1E1O43324 174 aaKnown RBP8.26□□□□□ -1.09
BRCA1-207ENST00000461798 AKAP10O43572 662 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 TYROBPO43914 113 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 LYPLA1O75608 230 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-207ENST00000461798 SOX30O94993 753 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 HSPA4LO95757 839 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 ANGPTL1O95841 491 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 TBXA2RP21731 343 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 ARRB2P32121 409 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 GPC1P35052 558 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 RPL3P39023 403 aaKnown RBP8.26□□□□□ -1.09
BRCA1-207ENST00000461798 ART1P52961 327 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 SUCLG1P53597 346 aaKnown RBP8.26□□□□□ -1.09
BRCA1-207ENST00000461798 DIO3P55073 304 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 RIPPLY3P57055 190 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 RPL38P63173 70 aaKnown RBP8.26□□□□□ -1.09
BRCA1-207ENST00000461798 HSPB3Q12988 150 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 GRAMD1BQ3KR37 738 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 CHMP1BQ7LBR1 199 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 EXOC3L1Q86VI1 746 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 GRAMD2AQ8IUY3 354 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 SLC16A11Q8NCK7 471 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 OR4C3Q8NH37 302 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 PSMA8Q8TAA3 256 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 LINC01560Q8TB33 94 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 GPR151Q8TDV0 419 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 ACTRT2Q8TDY3 377 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 PIK3R3Q92569 461 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 CAVIN3Q969G5 261 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 COQ8BQ96D53 544 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 MBD6Q96DN6 1003 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 STARD4Q96DR4 205 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 MS4A4EQ96PG1 132 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 PIGQQ9BRB3 760 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 RBM24Q9BX46 236 aaKnown RBP8.26□□□□□ -1.09
BRCA1-207ENST00000461798 TBL1XR1Q9BZK7 514 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 SIRT3Q9NTG7 399 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-207ENST00000461798 GIN1Q9NXP7 522 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 GALNT8Q9NY28 637 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 AP4B1Q9Y6B7 739 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 AKAP6Q13023 2319 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 KIAA1549Q9HCM3 1950 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 ABCA4P78363 2273 aa8.26□□□□□ -1.09
BRCA1-207ENST00000461798 A0A1W2PQD3 144 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 C7orf72A4D263 438 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 SLC22A20A6NK97 555 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 SPAG7O75391 227 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 KCNK2O95069 426 aa8.25□□□□□ -1.09
BRCA1-207ENST00000461798 CGAP01215 116 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms