RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ASB6Q9NWX5 421 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 COPZ2Q9P299 210 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 PSORS1C1Q9UIG5 152 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 PLEKHA6Q9Y2H5 1048 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 NPIPA5A0A0B4J1W7 369 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 NPIPA7E9PJI5 369 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 FMO6PO60774 539 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 LDB3O75112 727 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 NPIPA8P0DM63 369 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 DRD1P21728 446 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 PIGAP37287 484 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 CLRN1P58418 232 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 CTBSQ01459 385 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 FAM78AQ5JUQ0 283 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 OR5W2Q8NH69 310 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 ZMYND19Q96E35 227 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-205ENST00000460170 C1QTNF2Q9BXJ5 285 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 POTEKPQ9BYX7 375 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 USP36Q9P275 1121 aaKnown RBP13.89□□□□□ -0.19
PTPRU-205ENST00000460170 HTR3EA5X5Y0 456 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 KIAA0355O15063 1070 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 SMAD9O15198 467 aaKnown RBP13.89□□□□□ -0.19
PTPRU-205ENST00000460170 CASRP41180 1078 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 NSDHLQ15738 373 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 CCSMST1Q4G0I0 132 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 EIF5AL1Q6IS14 154 aaKnown RBP13.89□□□□□ -0.19
PTPRU-205ENST00000460170 PYHIN1Q6K0P9 492 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 MAMDC2Q7Z304 686 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-205ENST00000460170 TRMT10AQ8TBZ6 339 aaKnown RBP13.89□□□□□ -0.19
PTPRU-205ENST00000460170 CHTF18Q8WVB6 975 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 BPIFA2Q96DR5 249 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 DUS3LQ96G46 650 aaKnown RBP13.89□□□□□ -0.19
PTPRU-205ENST00000460170 EPHA6Q9UF33 1036 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 SPEF1Q9Y4P9 236 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 C13orf42A0A1B0GVH6 325 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 PRSS38A1L453 326 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 RIDAP52758 137 aaKnown RBP13.89□□□□□ -0.19
PTPRU-205ENST00000460170 ART1P52961 327 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 PRPS1P60891 318 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 ENTPD8Q5MY95 495 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 LRIF1Q5T3J3 769 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 ZNF283Q8N7M2 679 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 OR2L8Q8NGY9 312 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 MSLNLQ96KJ4 702 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 OR52D1Q9H346 318 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 ASB1Q9Y576 335 aa13.89□□□□□ -0.19
PTPRU-205ENST00000460170 KIAA0100Q14667 2235 aaKnown RBP13.89□□□□□ -0.19
PTPRU-205ENST00000460170 TEX46H3BTG2 121 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 TP53I11O14683 189 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 NPPBP16860 134 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 GTPBP2Q9BX10 602 aaKnown RBP13.88□□□□□ -0.19
PTPRU-205ENST00000460170 DEFB126Q9BYW3 111 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 CXorf36Q9H7Y0 433 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 B3GAT2Q9NPZ5 323 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 PHYHO14832 338 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 KLK8O60259 260 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 CDC40O60508 579 aaKnown RBP eCLIP13.88□□□□□ -0.19
PTPRU-205ENST00000460170 AIFM1O95831 613 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 FUT1P19526 365 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 PGGHGQ32M88 737 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 COX20Q5RI15 118 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 ZC3H14Q6PJT7 736 aaKnown RBP13.88□□□□□ -0.19
PTPRU-205ENST00000460170 CASTOR1Q8WTX7 329 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 MS4A8Q9BY19 250 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 ASB4Q9Y574 426 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 SEC14L2O76054 403 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 TNFSF8P32971 234 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 HTRA3P83110 453 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 RPE65Q16518 533 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 PLXDC1Q8IUK5 500 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 OR6C4Q8NGE1 309 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 SLCO4A1Q96BD0 722 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 MYEOVQ96EZ4 313 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 CPNE2Q96FN4 548 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-205ENST00000460170 HHIPL1Q96JK4 782 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 CARD8Q9Y2G2 431 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 IER3IP1Q9Y5U9 82 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 COL4A1P02462 1669 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 PRAMEF26H0Y7S4 382 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 SGK494L7N484 410 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 CTDSP2O14595 271 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 MAS1P04201 325 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 ACP2P11117 423 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 HOXC12P31275 282 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 CHRNEQ04844 493 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 TP53I3Q53FA7 332 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 CCNJQ5T5M9 372 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 TMEM164Q5U3C3 297 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 TMEM53Q6P2H8 277 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 ZNF584Q8IVC4 421 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 WBP2Q969T9 261 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 CLCC1Q96S66 551 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 LYSMD1Q96S90 227 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 TPSD1Q9BZJ3 242 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 TEX10Q9NXF1 929 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-205ENST00000460170 RABL2AQ9UBK7 228 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-205ENST00000460170 RABL2BQ9UNT1 228 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 LTBP4Q8N2S1 1624 aa13.88□□□□□ -0.19
PTPRU-205ENST00000460170 A0A0A6YYC8 382 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-205ENST00000460170 KIR2DS5A0A0G2JLQ3 304 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms