RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 SS18L1O75177 396 aaPredicted RBP12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 COQ9O75208 318 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 IL3P08700 152 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 IL11P20809 199 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 MPIP34949 423 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 EIF1AXP47813 144 aaKnown RBP12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 GNG11P61952 73 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 PSG6Q00889 435 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 ZNF155Q12901 538 aaPredicted RBP12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 CYP27C1Q4G0S4 372 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 FAM9CQ8IZT9 166 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 PLD6Q8N2A8 252 aaKnown RBP12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 OR7G2Q8NG99 324 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 FBXW5Q969U6 566 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 HBEGFQ99075 208 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 TACO1Q9BSH4 297 aaKnown RBP12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 OR10A4Q9H209 315 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 PAQR5Q9NXK6 330 aaPredicted RBP12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 MRTO4Q9UKD2 239 aaKnown RBP12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 MCTS1Q9ULC4 181 aaKnown RBP12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 CLEC4AQ9UMR7 237 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 GPR52Q9Y2T5 361 aa12.84□□□□□ -0.35
UPF3AP2-201ENST00000457924 MXRA5Q9NR99 2828 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 GNG14A0A1W2PPG7 69 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 OVOL3O00110 214 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 RAD51CO43502 376 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 SLC6A8P48029 635 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 HEPACAMQ14CZ8 416 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 DECR1Q16698 335 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 LGSNQ5TDP6 509 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 ALKBH2Q6NS38 261 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 ADAM5Q6NVV9 412 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 LETMD1Q6P1Q0 360 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 MARCH3Q86UD3 253 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 GGNQ86UU5 652 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 FBXO25Q8TCJ0 367 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 RTN4RQ9BZR6 473 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 SLC35C2Q9NQQ7 365 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 GLRX2Q9NS18 164 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 FAM120CQ9NX05 1096 aaKnown RBP12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 FLRT3Q9NZU0 649 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 XPR1Q9UBH6 696 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 NFU1Q9UMS0 254 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 UTP11Q9Y3A2 253 aaKnown RBP12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 RNF115Q9Y4L5 304 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 PRR14LQ5THK1 2151 aa12.83□□□□□ -0.36
UPF3AP2-201ENST00000457924 PPP6CO00743 305 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 CLOCKO15516 846 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 GMFGO60234 142 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 PCDH7O60245 1069 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 SOD3P08294 240 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 RPS17P08708 135 aaKnown RBP12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 CTAGE8P0CG41 777 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 HSD3B1P14060 373 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 TSPAN8P19075 237 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 HSD3B2P26439 372 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 ACVR1BP36896 505 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 CDKN1AP38936 164 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 PSMD4P55036 377 aaKnown RBP12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 CDH13P55290 713 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 C17orf67Q0P5P2 114 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 CTU2Q2VPK5 515 aaKnown RBP12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 CHRFAM7AQ494W8 412 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 SAMD5Q5TGI4 173 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 FIGNL1Q6PIW4 674 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 RPS27LQ71UM5 84 aaKnown RBP12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 WDR75Q8IWA0 830 aaKnown RBP12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 CTAGE4Q8IX94 777 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 STEAP2Q8NFT2 490 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 OR10D3Q8NH80 312 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 RAB3IL1Q8TBN0 382 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 ZNF483Q8TF39 744 aaPredicted RBP12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 ZBED6CLQ96FA7 236 aaPredicted RBP12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 BBS4Q96RK4 519 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 TBL1XR1Q9BZK7 514 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 Q9N2J8 555 aa12.82□□□□□ -0.36
UPF3AP2-201ENST00000457924 A8MV72 311 aaPredicted RBP12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 SHISA8B8ZZ34 492 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 OR4F21O95013 312 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 SYNGR4O95473 234 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 IL33O95760 270 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 KRT6AP02538 564 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 KRT6BP04259 564 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 C8BP07358 591 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 CD3EP07766 207 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 ZNF17P17021 662 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 PSMB1P20618 241 aaKnown RBP12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 RFX3P48380 749 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 KRT6CP48668 564 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 GUCY2DQ02846 1103 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 CSTF3Q12996 717 aaKnown RBP12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 ZNHIT3Q15649 155 aaPredicted RBP12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 TMEM44Q2T9K0 475 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 TSNAXIP1Q2TAA8 658 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 GTF2IRD2BQ6EKJ0 949 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 GTF2IRD2Q86UP8 949 aa12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 LILRB1Q8NHL6 650 aaPredicted RBP12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 SMAP2Q8WU79 429 aaPredicted RBP12.81□□□□□ -0.36
UPF3AP2-201ENST00000457924 S100PBPQ96BU1 408 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms