RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 IFI44LQ53G44 452 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 LACTB2Q53H82 288 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 LRIF1Q5T3J3 769 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 FRG2Q64ET8 278 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 HIST2H2AA3Q6FI13 130 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 CCBE1Q6UXH8 406 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZBTB49Q6ZSB9 765 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 PTCHD4Q6ZW05 846 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 AMIGO1Q86WK6 493 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 C17orf64Q86WR6 236 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 C17orf82Q86X59 251 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 GKN2Q86XP6 184 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SYT12Q8IV01 421 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC25A45Q8N413 288 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 GBP7Q8N8V2 638 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 UXS1Q8NBZ7 420 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF740Q8NDX6 193 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF548Q8NEK5 533 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR4K1Q8NGD4 311 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR2A1Q8NGT9 310 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR2T11Q8NH01 316 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 FAM110DQ8TAY7 271 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC37A2Q8TED4 501 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ROBO4Q8WZ75 1007 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 PIGKQ92643 395 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 CTHRC1Q96CG8 243 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 TUBGCP3Q96CW5 907 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 RNF31Q96EP0 1072 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 PTCD3Q96EY7 689 aaKnown RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 BSCL2Q96G97 398 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 NSL1Q96IY1 281 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 HARBI1Q96MB7 349 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 FRG2BQ96QU4 278 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 NEU1Q99519 415 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 PKP2Q99959 881 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ABHD14AQ9BUJ0 271 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 EFCAB11Q9BUY7 163 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 KATNB1Q9BVA0 655 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 RAB11FIP5Q9BXF6 653 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLCO5A1Q9H2Y9 848 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SRMSQ9H3Y6 488 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ELOVL6Q9H5J4 265 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF385DQ9H6B1 395 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 PELI2Q9HAT8 420 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 POT1Q9NUX5 634 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ARL8BQ9NVJ2 186 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SPHK1Q9NYA1 384 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ARMCX1Q9P291 453 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 TAC3Q9UHF0 121 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SNX6Q9UNH7 406 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 CSNK1G3Q9Y6M4 447 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 CNOT1A5YKK6 2376 aaKnown RBP4.84□□□□□ -1.64
HMGB1P4-201ENST00000455362 SCN3AQ9NY46 2000 aa4.84□□□□□ -1.64
HMGB1P4-201ENST00000455362 KMT2EQ8IZD2 1858 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ATXN2Q99700 1313 aaKnown RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 IGKV1-8A0A0C4DH67 115 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 OR6C74A6NCV1 312 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PCNX2A6NKB5 2137 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 B4DGG1 531 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 NPIPB8E9PQR5 432 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 H0YC42 278 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 AP4M1O00189 453 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PSMD12O00232 456 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 FOXE1O00358 373 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 CASQ2O14958 399 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 LSM1O15116 133 aaKnown RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 SLC22A2O15244 555 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 NOBOXO60393 691 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PRAMEF2O60811 474 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 SDC3O75056 442 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ATP5HO75947 161 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 RSL1D1O76021 490 aaKnown RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 KIAA0754O94854 1291 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 DIRAS3O95661 229 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 TGFAP01135 160 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 CHRM5P08912 532 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 LINGO3P0C6S8 592 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 GIMD1P0DJR0 217 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 CD1EP15812 388 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 GPX3P22352 226 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 HRH2P25021 359 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 CXCR2P25025 360 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PSMB5P28074 263 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PEBP1P30086 187 aaKnown RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PTGER1P34995 402 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ATP4BP51164 291 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 DIO3P55073 304 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 TPTEP56180 551 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 MAZP56270 477 aaKnown RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 RAC3P60763 192 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ERVK-8P63133 956 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 CSNK1G2P78368 415 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ABATP80404 500 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 HMGCS1Q01581 520 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 EMX2Q04743 252 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 KLF10Q13118 480 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 KIR2DS3Q14952 304 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 KIAA0040Q15053 153 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ELAVL1Q15717 326 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms