RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 FLYWCH1Q4VC44 716 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 SYT14P1Q58G82 188 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 HSDL2Q6YN16 418 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 SLC46A3Q7Z3Q1 461 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 RBM12BQ8IXT5 1001 aaKnown RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 LINC00471Q8N535 108 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 ACOT11Q8WXI4 607 aaPredicted RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 C6orf62Q9GZU0 229 aaPredicted RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 ZNF350Q9GZX5 532 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 SPRTNQ9H040 489 aaPredicted RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 SLC25A19Q9HC21 320 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 CNOT2Q9NZN8 540 aaKnown RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 DTX4Q9Y2E6 619 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 RPL36Q9Y3U8 105 aaKnown RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 HYKKA2RU49 373 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 RHPN2P1A8MT19 583 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 A8MU76 341 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 WWP2O00308 870 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 RNH1P13489 461 aaKnown RBP10.94□□□□□ -0.66
VTA1-203ENST00000452973 GSTM3P21266 225 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 BCKDHBP21953 392 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 OMPP47874 163 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 SERPINB10P48595 397 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 DUSP8Q13202 625 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 PRAMEF17Q5VTA0 474 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 SMARCD3Q6STE5 483 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 Q7L0L9 218 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 RANBP3LQ86VV4 465 aaPredicted RBP10.94□□□□□ -0.66
VTA1-203ENST00000452973 CROCCP3Q8IVE0 287 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 Q8N9G6 341 aaPredicted RBP10.94□□□□□ -0.66
VTA1-203ENST00000452973 NACC2Q96BF6 587 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 TMEM80Q96HE8 168 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 AHCYL2Q96HN2 611 aaKnown RBP10.94□□□□□ -0.66
VTA1-203ENST00000452973 ATP13A2Q9NQ11 1180 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 FRYLO94915 3013 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 CDC42EP2O14613 210 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 GNB5O14775 395 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 PFDN1O60925 122 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 SLC35E2P0CK97 266 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 HTR2AP28223 471 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 ZNF136P52737 540 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 EEF1A1P68104 462 aaKnown RBP10.94□□□□□ -0.66
VTA1-203ENST00000452973 TSPAN31Q12999 210 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.94□□□□□ -0.66
VTA1-203ENST00000452973 PDZK1Q5T2W1 519 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 PFN4Q8NHR9 129 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 MCFD2Q8NI22 146 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 TRUB1Q8WWH5 349 aaKnown RBP10.94□□□□□ -0.66
VTA1-203ENST00000452973 TCTN2Q96GX1 697 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 SPACA7Q96KW9 195 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 ZNF582Q96NG8 517 aaPredicted RBP10.94□□□□□ -0.66
VTA1-203ENST00000452973 CDCA4Q9BXL8 241 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 DPH1Q9BZG8 443 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 PRTFDC1Q9NRG1 225 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 DUSP22Q9NRW4 184 aa10.94□□□□□ -0.66
VTA1-203ENST00000452973 TMEM184BQ9Y519 407 aaPredicted RBP10.94□□□□□ -0.66
VTA1-203ENST00000452973 THADAQ6YHU6 1953 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 A0A087WV62 115 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 DBIP07108 87 aaKnown RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 FASLGP48023 281 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 CDK5Q00535 292 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 TEKQ02763 1124 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 IRF3Q14653 427 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 LRIT3Q3SXY7 679 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 B3GLCTQ6Y288 498 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 GJD3Q8N144 294 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 CRELD1Q96HD1 420 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 PTCHD1Q96NR3 888 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 POLDIP3Q9BY77 421 aaKnown RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 POLR2J2Q9GZM3 115 aaKnown RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 LRIT1Q9P2V4 623 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 FAM183AA6NL82 134 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 A8MUA0 341 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 CLDN25C9JDP6 229 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 SOX1O00570 391 aaPredicted RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 ARHGAP33O14559 1287 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 KCNK2O95069 426 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 SLC2A10O95528 541 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 NID1P14543 1247 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 NUDT1P36639 197 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 SLC15A1P46059 708 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 OR1D5P58170 312 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 HNRNPKP61978 463 aaKnown RBP eCLIP10.93□□□□□ -0.66
VTA1-203ENST00000452973 SPHARQ15513 63 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 OR1Q1Q15612 314 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 ZNHIT3Q15649 155 aaPredicted RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 EIPR1Q53HC9 387 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 PERM1Q5SV97 790 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 SLC35F1Q5T1Q4 408 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 CD300LDQ6UXZ3 194 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 WDR88Q6ZMY6 472 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 IGFN1Q86VF2 1251 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 CNOT9Q92600 299 aaKnown RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 SAMD8Q96LT4 415 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 RHBDL2Q9NX52 303 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 ERVK-19Q9WJR5 959 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 MRPS33Q9Y291 106 aaKnown RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 CSNK1G3Q9Y6M4 447 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 MUC3AQ02505 3323 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 CLDN4O14493 209 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms