RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 PLK5Q496M5 336 aa6.09□□□□□ -1.43
USP46-202ENST00000451218 PRSS48Q7RTY5 328 aa6.09□□□□□ -1.43
USP46-202ENST00000451218 LAPTM4BQ86VI4 370 aa6.09□□□□□ -1.43
USP46-202ENST00000451218 C9orf40Q8IXQ3 194 aa6.09□□□□□ -1.43
USP46-202ENST00000451218 NECAB3Q96P71 396 aaPredicted RBP6.09□□□□□ -1.43
USP46-202ENST00000451218 CDCA4Q9BXL8 241 aa6.09□□□□□ -1.43
USP46-202ENST00000451218 FOLH1BQ9HBA9 442 aa6.09□□□□□ -1.43
USP46-202ENST00000451218 EQTNQ9NQ60 294 aa6.09□□□□□ -1.43
USP46-202ENST00000451218 GPR83Q9NYM4 423 aa6.09□□□□□ -1.43
USP46-202ENST00000451218 SIT1Q9Y3P8 196 aa6.09□□□□□ -1.43
USP46-202ENST00000451218 PHF3Q92576 2039 aaKnown RBP6.09□□□□□ -1.43
USP46-202ENST00000451218 A0A1W2PNU3 283 aaPredicted RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 TCRBV16S1A1N1A0A5B0 115 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 FAAHO00519 579 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 BCAT2O15382 392 aaPredicted RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 FOXD2O60548 495 aaPredicted RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 SRPX2O60687 465 aaPredicted RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 PTP4A3O75365 173 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 PDE9AO76083 593 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 OXSR1O95747 527 aaPredicted RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 ANGPTL1O95841 491 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 IFNW1P05000 195 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 HBQ1P09105 142 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 ADORA3P0DMS8 318 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 ENDOUP21128 410 aaKnown RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 NTSP30990 170 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 RPS6KA3P51812 740 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 AFF3P51826 1226 aaKnown RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 CRISP1P54107 249 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 NUP107P57740 925 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 KLHL26Q53HC5 615 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 BTLAQ7Z6A9 289 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 UBALD2Q8IYN6 164 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 NFAM1Q8NET5 270 aaPredicted RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 B3GNT7Q8NFL0 401 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 PFN4Q8NHR9 129 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 VANGL1Q8TAA9 524 aaPredicted RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 GTPBP3Q969Y2 492 aaKnown RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 NXF2Q9GZY0 626 aaKnown RBP6.09□□□□□ -1.44
USP46-202ENST00000451218 MS4A12Q9NXJ0 267 aa6.09□□□□□ -1.44
USP46-202ENST00000451218 KNL1Q8NG31 2342 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 SDK2Q58EX2 2172 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 A0A0B4J2E0 115 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 A0A1B0GTQ1 180 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 A0A1B0GX12 115 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 H0YIG0 161 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 DSCR3O14972 297 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 LRRTM2O43300 516 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 FZD7O75084 574 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ANKRD34CP0C6C1 535 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 PIPP12273 146 aaPredicted RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 GLB1P16278 677 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ESRRGP62508 458 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 CSTF1Q05048 431 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 NFATC3Q12968 1075 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 KRT33BQ14525 404 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ZC3H14Q6PJT7 736 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 ZNF517Q6ZMY9 492 aaPredicted RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 ERI1Q8IV48 349 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 IQCF1Q8N6M8 205 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 FAM181AQ8N9Y4 354 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 RCBTB1Q8NDN9 531 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 C16orf52Q8NHV5 167 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 DYNC2LI1Q8TCX1 351 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ZNRF4Q8WWF5 429 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 RPL3LQ92901 407 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 MAGED4Q96JG8 741 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 SPACA7Q96KW9 195 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 DCLRE1CQ96SD1 692 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 HCAR1Q9BXC0 346 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 POLR1BQ9H9Y6 1135 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 FANCFQ9NPI8 374 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 IL20Q9NYY1 176 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 PPIEQ9UNP9 301 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 SF3B6Q9Y3B4 125 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 CORINQ9Y5Q5 1042 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 UNC13CQ8NB66 2214 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 HYKKA2RU49 373 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 CCDC182A6NF36 153 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 NTN3O00634 580 aaPredicted RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 CTNSO60931 367 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 CCNB2O95067 398 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ANXA8P13928 327 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 PNLIPP16233 465 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 PRIM2P49643 509 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ZNF155Q12901 538 aaPredicted RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 CD226Q15762 336 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 FAM214AQ32MH5 1076 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 MRPL2Q5T653 305 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 ZCCHC12Q6PEW1 402 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 PAQR6Q6TCH4 344 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ANGPTL8Q6UXH0 198 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 CARFQ8N187 725 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 LSMEM1Q8N8F7 131 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ROGDIQ9GZN7 287 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 SLIRPQ9GZT3 109 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 ANKRD19PQ9H560 264 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 RNF167Q9H6Y7 350 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 SEMA3GQ9NS98 782 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 LRIT1Q9P2V4 623 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms