RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 ADAM29Q9UKF5 820 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 MTCL1Q9Y4B5 1905 aaKnown RBP10.59□□□□□ -0.71
SYVN1-204ENST00000449943 CASC3O15234 703 aaKnown RBP10.59□□□□□ -0.71
SYVN1-204ENST00000449943 PAK4O96013 591 aaPredicted RBP10.59□□□□□ -0.71
SYVN1-204ENST00000449943 FUT1P19526 365 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 CSNK2A2P19784 350 aaPredicted RBP10.59□□□□□ -0.71
SYVN1-204ENST00000449943 DSG2Q14126 1118 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 TMEM52BQ4KMG9 183 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 CPOQ8IVL8 374 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 MRPL48Q96GC5 212 aaKnown RBP10.59□□□□□ -0.71
SYVN1-204ENST00000449943 CAMK1GQ96NX5 476 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 KXD1Q9BQD3 176 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 LMAN2LQ9H0V9 348 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 ISG20L2Q9H9L3 353 aaKnown RBP10.59□□□□□ -0.71
SYVN1-204ENST00000449943 AKAP7Q9P0M2 348 aaPredicted RBP10.59□□□□□ -0.71
SYVN1-204ENST00000449943 ACSL5Q9ULC5 683 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 KDM4EB2RXH2 506 aaPredicted RBP10.59□□□□□ -0.71
SYVN1-204ENST00000449943 HLA-DPB1P04440 258 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 AHRP35869 848 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 MLLT3P42568 568 aaPredicted RBP10.59□□□□□ -0.71
SYVN1-204ENST00000449943 PDX1P52945 283 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 LRRC32Q14392 662 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 MLC1Q15049 377 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 LRRK1Q38SD2 2015 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 RASSF6Q6ZTQ3 369 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 SIMC1Q8NDZ2 872 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 OR56A1Q8NGH5 318 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 MS4A6EQ96DS6 147 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 TNFRSF10DQ9UBN6 386 aa10.59□□□□□ -0.71
SYVN1-204ENST00000449943 ZFR2Q9UPR6 939 aaKnown RBP10.59□□□□□ -0.71
SYVN1-204ENST00000449943 NOTCH4Q99466 2003 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 TRDV1A0A1B0GX56 115 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 TRAPPC2P0DI81 140 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 TRAPPC2BP0DI82 140 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 NOS3P29474 1203 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 OMPP47874 163 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 CAMK1Q14012 370 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 KLHL12Q53G59 568 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 PLBD1Q6P4A8 553 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 ADAMTSL4Q6UY14 1074 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 FBXL6Q8N531 539 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 GALNT6Q8NCL4 622 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 TSTD1Q8NFU3 115 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 UPRTQ96BW1 309 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 SENP5Q96HI0 755 aaPredicted RBP10.58□□□□□ -0.72
SYVN1-204ENST00000449943 TAS2R7Q9NYW3 318 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 OR10H1Q9Y4A9 318 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 SURF4O15260 269 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 SCO2O43819 266 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 PLOD3O60568 738 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 HCN1O60741 890 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 TSC22D2O75157 780 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 ATP5A1P25705 553 aaKnown RBP10.58□□□□□ -0.72
SYVN1-204ENST00000449943 GCGRP47871 477 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 RAB28P51157 221 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 BTN3A2P78410 334 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 EFR3AQ14156 821 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 DUSP6Q16828 381 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 RNASE12Q5GAN4 147 aaKnown RBP10.58□□□□□ -0.72
SYVN1-204ENST00000449943 OR4N5Q8IXE1 308 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 GPR135Q8IZ08 494 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 SIRT6Q8N6T7 355 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 DIO2Q92813 273 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 TRIM43Q96BQ3 446 aaPredicted RBP10.58□□□□□ -0.72
SYVN1-204ENST00000449943 CITED4Q96RK1 184 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 RBFOX1Q9NWB1 397 aaKnown RBP10.58□□□□□ -0.72
SYVN1-204ENST00000449943 MCUBQ9NWR8 336 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 EXTL2Q9UBQ6 330 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 SLC7A7Q9UM01 511 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 CLEC4AQ9UMR7 237 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 ASB4Q9Y574 426 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 CDH23Q9H251 3354 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 COL4A3Q01955 1670 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 MID1O15344 667 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 EMC8O43402 210 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 PAICSP22234 425 aaKnown RBP10.58□□□□□ -0.72
SYVN1-204ENST00000449943 UBXN2BQ14CS0 331 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 PGGHGQ32M88 737 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 CCDC157Q569K6 752 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 MZT2AQ6P582 158 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 ABHD17CQ6PCB6 329 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 OSTF1Q92882 214 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 SLC41A3Q96GZ6 507 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 GALNT9Q9HCQ5 603 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 SLC6A20Q9NP91 592 aa10.58□□□□□ -0.72
SYVN1-204ENST00000449943 NOTOA8MTQ0 251 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 CENPBD1B2RD01 187 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 LINC00271P0C7V0 271 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 MPIP34949 423 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 RPS21P63220 83 aaKnown RBP10.57□□□□□ -0.72
SYVN1-204ENST00000449943 ZNF155Q12901 538 aaPredicted RBP10.57□□□□□ -0.72
SYVN1-204ENST00000449943 BTBD16Q32M84 506 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 CCNJQ5T5M9 372 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 PRR23CQ6ZRP0 262 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 KIAA1143Q96AT1 154 aaPredicted RBP10.57□□□□□ -0.72
SYVN1-204ENST00000449943 SPACA7Q96KW9 195 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 RNF32Q9H0A6 362 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 SLA2Q9H6Q3 261 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 PPP1R3EQ9H7J1 279 aa10.57□□□□□ -0.72
SYVN1-204ENST00000449943 HINT3Q9NQE9 182 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms