RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 IL23RQ5VWK5 629 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 MFSD12Q6NUT3 480 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 FIGNL1Q6PIW4 674 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 PLXDC2Q6UX71 529 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 ADGRE4PQ86SQ3 457 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 NATD1Q8N6N6 113 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 COX18Q8N8Q8 333 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 SLC16A11Q8NCK7 471 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 OR7A2PQ8NGA2 310 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 OR6Y1Q8NGX8 325 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 GOT1L1Q8NHS2 421 aaPredicted RBP13.82□□□□□ -0.2
CHD3-205ENST00000449744 FAM222BQ8WU58 562 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 HOXB13Q92826 284 aaPredicted RBP13.82□□□□□ -0.2
CHD3-205ENST00000449744 C1GALT1C1Q96EU7 318 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 GIMAP5Q96F15 307 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 PKNOX2Q96KN3 472 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 C3orf30Q96M34 536 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 PIGQQ9BRB3 760 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 YIPF4Q9BSR8 244 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 G6PC3Q9BUM1 346 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 RTN4RQ9BZR6 473 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 CENPHQ9H3R5 247 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 CLCF1Q9UBD9 225 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 EIF3LQ9Y262 564 aaKnown RBP13.82□□□□□ -0.2
CHD3-205ENST00000449744 SNX8Q9Y5X2 465 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 FBN2P35556 2912 aa13.82□□□□□ -0.2
CHD3-205ENST00000449744 TUBAL3A6NHL2 446 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 H3BML4 177 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 NDUFB5O43674 189 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 GMFGO60234 142 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 LAMP1P11279 417 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 HPGDP15428 266 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 CPA2P48052 419 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 DIO3P55073 304 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 RIPPLY3P57055 190 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 MAD2L1Q13257 205 aaPredicted RBP13.81□□□□□ -0.2
CHD3-205ENST00000449744 PTGR1Q14914 329 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 DUSP5Q16690 384 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 LSM12Q3MHD2 195 aaKnown RBP13.81□□□□□ -0.2
CHD3-205ENST00000449744 SPDYE7PQ495Y7 208 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 GLYR1Q49A26 553 aaPredicted RBP13.81□□□□□ -0.2
CHD3-205ENST00000449744 GALNT10Q86SR1 603 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 LUZP2Q86TE4 346 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 GCNT2Q8N0V5 402 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 OR5M1Q8NGP8 315 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 OR5P2Q8WZ92 322 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 FAM120BQ96EK7 910 aaKnown RBP13.81□□□□□ -0.2
CHD3-205ENST00000449744 C16orf58Q96GQ5 468 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 GPATCH1Q9BRR8 931 aaKnown RBP13.81□□□□□ -0.2
CHD3-205ENST00000449744 RBM24Q9BX46 236 aaKnown RBP13.81□□□□□ -0.2
CHD3-205ENST00000449744 POLDIP3Q9BY77 421 aaKnown RBP13.81□□□□□ -0.2
CHD3-205ENST00000449744 ZNF337Q9Y3M9 751 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 C2CD3Q4AC94 2353 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 CCDC168Q8NDH2 2452 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 DOCK7Q96N67 2140 aa13.81□□□□□ -0.2
CHD3-205ENST00000449744 OR2M5A3KFT3 312 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 SLC22A20A6NK97 555 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 ALG1L2C9J202 215 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 SEC14L5O43304 696 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 HCRTR2O43614 444 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 CTAG2O75638 210 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 KCNK2O95069 426 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 OXSR1O95747 527 aaPredicted RBP13.8□□□□□ -0.2
CHD3-205ENST00000449744 SERPINE1P05121 402 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 PRPS1L1P21108 318 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 RPS3AP61247 264 aaKnown RBP13.8□□□□□ -0.2
CHD3-205ENST00000449744 POU6F2P78424 691 aaPredicted RBP13.8□□□□□ -0.2
CHD3-205ENST00000449744 SORDQ00796 357 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 LASP1Q14847 261 aaKnown RBP13.8□□□□□ -0.2
CHD3-205ENST00000449744 CHI3L2Q15782 390 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHD3-205ENST00000449744 CEP85LQ5SZL2 805 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 FBXW10Q5XX13 1052 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 OR2A2Q6IF42 318 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 OR4C3Q8NH37 302 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 FAM110BQ8TC76 370 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 SMPDL3BQ92485 455 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 OTUB1Q96FW1 271 aaPredicted RBP13.8□□□□□ -0.2
CHD3-205ENST00000449744 PIGMQ9H3S5 423 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 SSU72Q9NP77 194 aaKnown RBP13.8□□□□□ -0.2
CHD3-205ENST00000449744 SIRT3Q9NTG7 399 aaPredicted RBP13.8□□□□□ -0.2
CHD3-205ENST00000449744 JKAMPQ9P055 326 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 STOML1Q9UBI4 398 aa13.8□□□□□ -0.2
CHD3-205ENST00000449744 FAF1Q9UNN5 650 aaPredicted RBP13.8□□□□□ -0.2
CHD3-205ENST00000449744 PDZD2O15018 2839 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 IGLV3-32A0A0A0MS00 114 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 SCDO00767 359 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 TM9SF1O15321 606 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 BIRC5O15392 142 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 CFLARO15519 480 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 ITM2AO43736 263 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 C6orf47O95873 294 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 TGM6O95932 706 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 HMGN2P05204 90 aaKnown RBP13.79□□□□□ -0.2
CHD3-205ENST00000449744 TUBBP07437 444 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 NGFRP08138 427 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 KRT16P08779 473 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 MYZAPP0CAP1 466 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 ATP6V1C1P21283 382 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 TBXA2RP21731 343 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms