RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 FAM173AQ9BQD7 235 aa12.86□□□□□ -0.35
CTSS-202ENST00000448301 SLC38A1Q9H2H9 487 aa12.86□□□□□ -0.35
CTSS-202ENST00000448301 RUBCNLQ9H714 662 aa12.86□□□□□ -0.35
CTSS-202ENST00000448301 DEPPQ9NTK1 212 aa12.86□□□□□ -0.35
CTSS-202ENST00000448301 NDE1Q9NXR1 346 aa12.86□□□□□ -0.35
CTSS-202ENST00000448301 FLRT3Q9NZU0 649 aa12.86□□□□□ -0.35
CTSS-202ENST00000448301 NINQ8N4C6 2090 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 A0A1W2PQD3 144 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 ALG1L2C9J202 215 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 SCDO00767 359 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 ADAM10O14672 748 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 PEX1O43933 1283 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 SORBS2O94875 1100 aaKnown RBP12.85□□□□□ -0.35
CTSS-202ENST00000448301 UBOX5O94941 541 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 SNX4O95219 450 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 OXSR1O95747 527 aaPredicted RBP12.85□□□□□ -0.35
CTSS-202ENST00000448301 T-ENOLP0DO92 83 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 DNASE1L1P49184 302 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 CLK3P49761 638 aaKnown RBP12.85□□□□□ -0.35
CTSS-202ENST00000448301 MEOX1P50221 254 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 GZMMP51124 257 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 ATP12AP54707 1039 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 GPR85P60893 370 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 PSME3P61289 254 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 KCNJ2P63252 427 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 CHRNEQ04844 493 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 GPR68Q15743 365 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 ADRM1Q16186 407 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 ZNF630Q2M218 657 aaPredicted RBP12.85□□□□□ -0.35
CTSS-202ENST00000448301 BICRALQ6AI39 1079 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 OLIG3Q7RTU3 272 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 CALHM3Q86XJ0 350 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 PTRH1Q86Y79 214 aaKnown RBP12.85□□□□□ -0.35
CTSS-202ENST00000448301 PTOV1Q86YD1 416 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 SLC15A3Q8IY34 581 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 PGAM4Q8N0Y7 254 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 ZNF527Q8NB42 609 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 OR4C3Q8NH37 302 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 MAL2Q969L2 176 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 TMEM41AQ96HV5 264 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 FRMD6Q96NE9 622 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 BBC3Q96PG8 261 aaPredicted RBP12.85□□□□□ -0.35
CTSS-202ENST00000448301 DOHHQ9BU89 302 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 BCL2L10Q9HD36 194 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 CMTM6Q9NX76 183 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 ABCD2Q9UBJ2 740 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 ANAPC2Q9UJX6 822 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 MKLN1Q9UL63 735 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 L3MBTL1Q9Y468 752 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 DSPPQ9NZW4 1301 aa12.85□□□□□ -0.35
CTSS-202ENST00000448301 NPIPA5A0A0B4J1W7 369 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 A0A0G2JMM0 328 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 A0A0G2JPF8 293 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 A0A1W2PPB8 328 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 A0A1W2PRS3 328 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 KIR3DP1A8MWS1 328 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 HNRNPCL2B2RXH8 293 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 HNRNPCL3B7ZW38 293 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 C5orf58C9J3I9 102 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 NPIPA7E9PJI5 369 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 G3V3Y1 287 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 NME4O00746 187 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 HNRNPCL1O60812 293 aaKnown RBP12.84□□□□□ -0.35
CTSS-202ENST00000448301 TRIM3O75382 744 aaPredicted RBP12.84□□□□□ -0.35
CTSS-202ENST00000448301 UGT2B17O75795 530 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 RASAL1O95294 804 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 NPIPA8P0DM63 369 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 HNRNPCL4P0DMR1 293 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 HPGDP15428 266 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 SLC7A2P52569 658 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 GAS1P54826 345 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 MXRA7P84157 204 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 CDK6Q00534 326 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 SCARB2Q14108 478 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 ZNF141Q15928 474 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 C6orf89Q6UWU4 347 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 C16orf89Q6UX73 402 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 ZZZ3Q8IYH5 903 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 ZFP62Q8NB50 900 aaPredicted RBP12.84□□□□□ -0.35
CTSS-202ENST00000448301 C11orf65Q8NCR3 313 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 FBXO27Q8NI29 283 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 NFKBIDQ8NI38 313 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 BBS10Q8TAM1 723 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 REXO5Q96IC2 774 aaKnown RBP12.84□□□□□ -0.35
CTSS-202ENST00000448301 ZNF597Q96LX8 424 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 ZNF583Q96ND8 569 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 TREX2Q9BQ50 279 aaPredicted RBP12.84□□□□□ -0.35
CTSS-202ENST00000448301 TBL1XR1Q9BZK7 514 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 GALNT9Q9HCQ5 603 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 SPAG4Q9NPE6 437 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 LUZP4Q9P127 313 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 SUCOQ9UBS9 1254 aaKnown RBP12.84□□□□□ -0.35
CTSS-202ENST00000448301 WIF1Q9Y5W5 379 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.84□□□□□ -0.35
CTSS-202ENST00000448301 NCKAP5O14513 1909 aa12.84□□□□□ -0.35
CTSS-202ENST00000448301 TLN1Q9Y490 2541 aaKnown RBP12.83□□□□□ -0.36
CTSS-202ENST00000448301 PINLYPA6NC86 204 aa12.83□□□□□ -0.36
CTSS-202ENST00000448301 FAM220BPB1ANY3 271 aa12.83□□□□□ -0.36
CTSS-202ENST00000448301 B2RBV5 119 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms