RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 SCARB2Q14108 478 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 SELPLGQ14242 412 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 ZNF169Q14929 603 aaPredicted RBP10.63□□□□□ -0.71
LINC00408-201ENST00000447784 SYPL1Q16563 259 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 REEP3Q6NUK4 255 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 RPUSD3Q6P087 351 aaKnown RBP10.63□□□□□ -0.71
LINC00408-201ENST00000447784 LRRC74BQ6ZQY2 392 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 CCDC121Q6ZUS5 278 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 MDGA2Q7Z553 956 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 PACS2Q86VP3 889 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 IFNEQ86WN2 208 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 KRT73Q86Y46 540 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 SLC15A3Q8IY34 581 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 DEFB107AQ8IZN7 70 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 FBXW8Q8N3Y1 598 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 ZNF614Q8N883 585 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 MDS2Q8NDY4 140 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 TNIP2Q8NFZ5 429 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 OR2T12Q8NG77 320 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 NFKBIDQ8NI38 313 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 PAQR8Q8TEZ7 354 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 SLC38A5Q8WUX1 472 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 PMM1Q92871 262 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 HGDQ93099 445 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 MAL2Q969L2 176 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 SNRNP40Q96DI7 357 aaKnown RBP10.63□□□□□ -0.71
LINC00408-201ENST00000447784 SIGLEC12Q96PQ1 595 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 BARD1Q99728 777 aaKnown RBP10.63□□□□□ -0.71
LINC00408-201ENST00000447784 FAM173AQ9BQD7 235 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 DOHHQ9BU89 302 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 TMEM38AQ9H6F2 299 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 MTHFD2LQ9H903 347 aaPredicted RBP10.63□□□□□ -0.71
LINC00408-201ENST00000447784 LUZP4Q9P127 313 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 MKLN1Q9UL63 735 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 ABCG2Q9UNQ0 655 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 ZNF232Q9UNY5 417 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 PCDHGA10Q9Y5H3 936 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 CSAG2Q9Y5P2 127 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 HELZ2Q9BYK8 2649 aaKnown RBP10.63□□□□□ -0.71
LINC00408-201ENST00000447784 A0A0G2JPF8 293 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 CLEC18AA5D8T8 446 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 ANKRD33BA6NCL7 494 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 HNRNPCL2B2RXH8 293 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 HNRNPCL3B7ZW38 293 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 PEX1O43933 1283 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 NME2P1O60361 137 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 FCMRO60667 390 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 SERPINB7O75635 380 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 NGFRP08138 427 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 HNRNPCL4P0DMR1 293 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 T-ENOLP0DO92 83 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 CCL3P10147 92 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 ENDOUP21128 410 aaKnown RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 TBXA2RP21731 343 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 NME2P22392 152 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 EVI2BP34910 448 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 DCTP40126 519 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 CASP3P42574 277 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 ATP12AP54707 1039 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 EEFSECP57772 596 aaKnown RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 CHRNEQ04844 493 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 GABPB1Q06547 395 aaPredicted RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 SNTA1Q13424 505 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 SAMD4BQ5PRF9 694 aaKnown RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 INTS11Q5TA45 600 aaKnown RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 PRAMEF20Q5VT98 475 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 PRAMEF8Q5VWM4 474 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 PRAMEF7Q5VXH5 474 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 SLC30A6Q6NXT4 461 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 CLEC18BQ6UXF7 455 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 BNC2Q6ZN30 1099 aaPredicted RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 GALNTL5Q7Z4T8 443 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 PEX5LQ8IYB4 626 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 ZNF619Q8N2I2 560 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 CLEC18CQ8NCF0 446 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 HIPK4Q8NE63 616 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 OR4C3Q8NH37 302 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 BBS10Q8TAM1 723 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 OIT3Q8WWZ8 545 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 DTNBP1Q96EV8 351 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 TMEM19Q96HH6 336 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 REXO5Q96IC2 774 aaKnown RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 JSRP1Q96MG2 331 aaPredicted RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 NODALQ96S42 347 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 ZNF607Q96SK3 696 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 CDRT15Q96T59 188 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 KCTD14Q9BQ13 255 aaPredicted RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 TREX2Q9BQ50 279 aaPredicted RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 SPATA5L1Q9BVQ7 753 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 OSBPL11Q9BXB4 747 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 ZNF350Q9GZX5 532 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 ARMC7Q9H6L4 198 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 FBXO34Q9NWN3 711 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 CMTM6Q9NX76 183 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 BOKQ9UMX3 212 aaPredicted RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 CHCHD2Q9Y6H1 151 aaPredicted RBP10.62□□□□□ -0.71
LINC00408-201ENST00000447784 MAST4O15021 2626 aa10.62□□□□□ -0.71
LINC00408-201ENST00000447784 NUP210LQ5VU65 1888 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms