RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 OR2L5Q8NG80 312 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 RAB7BQ96AH8 199 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 FERD3LQ96RJ6 166 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 MCHR1Q99705 422 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 HDAC8Q9BY41 377 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 ACTRT3Q9BYD9 372 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 ISG20L2Q9H9L3 353 aaKnown RBP17.82■□□□□ 0.44
SDCBP-204ENST00000447182 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 HRO43593 1189 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 ZIC2O95409 532 aaPredicted RBP17.81■□□□□ 0.44
SDCBP-204ENST00000447182 PCCBP05166 539 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 RBMS1P29558 406 aaKnown RBP17.81■□□□□ 0.44
SDCBP-204ENST00000447182 AHRP35869 848 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 TSFMP43897 325 aaKnown RBP17.81■□□□□ 0.44
SDCBP-204ENST00000447182 PRMT2P55345 433 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 SHC2P98077 582 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 IDNKQ5T6J7 187 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 C18orf63Q68DL7 685 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 HEPHL1Q6MZM0 1159 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 C16orf62Q7Z3J2 963 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 GIMAP5Q96F15 307 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 MED30Q96HR3 178 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 ZNF681Q96N22 645 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 INSM2Q96T92 566 aaPredicted RBP17.81■□□□□ 0.44
SDCBP-204ENST00000447182 HDHD2Q9H0R4 259 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 UBQLN3Q9H347 655 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 FN3KQ9H479 309 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 EQTNQ9NQ60 294 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 TMEM39AQ9NV64 488 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 MRPL39Q9NYK5 338 aaKnown RBP17.81■□□□□ 0.44
SDCBP-204ENST00000447182 NTNG1Q9Y2I2 539 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 HSPB11Q9Y547 144 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 A0A1W2PS29 197 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 DVL2O14641 736 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 CD53P19397 219 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 TALDO1P37837 337 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 GCGRP47871 477 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 FAM209AQ5JX71 171 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 OAFQ86UD1 273 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 GHDCQ8N2G8 530 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 OR51G2Q8NGK0 314 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 OR2L8Q8NGY9 312 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 BRIX1Q8TDN6 353 aaKnown RBP17.81■□□□□ 0.44
SDCBP-204ENST00000447182 GANCQ8TET4 914 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 TMEM255BQ8WV15 326 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 RFT1Q96AA3 541 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 AHCYL2Q96HN2 611 aaKnown RBP17.81■□□□□ 0.44
SDCBP-204ENST00000447182 TIMP4Q99727 224 aa17.81■□□□□ 0.44
SDCBP-204ENST00000447182 THAP7Q9BT49 309 aaPredicted RBP17.81■□□□□ 0.44
SDCBP-204ENST00000447182 TRMT61BQ9BVS5 477 aaKnown RBP17.81■□□□□ 0.44
SDCBP-204ENST00000447182 KRCC1Q9NPI7 259 aaPredicted RBP17.81■□□□□ 0.44
SDCBP-204ENST00000447182 C12orf71A8MTZ7 269 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 GPR89AB7ZAQ6 455 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 PIP5K1CO60331 668 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 GPR89BP0CG08 455 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 PKLRP30613 574 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 THBS2P35442 1172 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 OR3A3P47888 321 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 ERVK-21P61565 698 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 SNRPD2P62316 118 aaKnown RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 ANGPT1Q15389 498 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 HACD4Q5VWC8 232 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 MRPL43Q8N983 215 aaKnown RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 OR9A2Q8NGT5 310 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 SAMD8Q96LT4 415 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 C12orf66Q96MD2 445 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 NECTIN4Q96NY8 510 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 FCRL4Q96PJ5 515 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 MACROD1Q9BQ69 325 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 SARGQ9BW04 601 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 RAB11FIP5Q9BXF6 653 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 PIGUQ9H490 435 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 MRPS30Q9NP92 439 aaKnown RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 IMP3Q9NV31 184 aaKnown RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 ZFR2Q9UPR6 939 aaKnown RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 SIRT4Q9Y6E7 314 aaPredicted RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 SMLR1H3BR10 107 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 RFXAPO00287 272 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 CDC42EP2O14613 210 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 FCMRO60667 390 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 PAHP00439 452 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 STATHP02808 62 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 CEBPBP17676 345 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 PAICSP22234 425 aaKnown RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 F8A1P23610 371 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 PDX1P52945 283 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 LRRC32Q14392 662 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 ZNF234Q14588 700 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 FAM214AQ32MH5 1076 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 CDC73Q6P1J9 531 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 NIPAL3Q6P499 406 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 ZNF782Q6ZMW2 699 aaPredicted RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 MEPCEQ7L2J0 689 aaKnown RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 C9orf62Q8N4C0 152 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 SRFBP1Q8NEF9 429 aaKnown RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 ALG8Q9BVK2 526 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 OSGEPL1Q9H4B0 414 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 XKR8Q9H6D3 395 aa17.8■□□□□ 0.44
SDCBP-204ENST00000447182 ZNF443Q9Y2A4 671 aaPredicted RBP17.8■□□□□ 0.44
SDCBP-204ENST00000447182 NCKAP1Q9Y2A7 1128 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms