RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SRSF10O75494 262 aaKnown RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 PDGFBP01127 241 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 GOLGA8HP0CJ92 632 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 PDHBP11177 359 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 GCFC2P16383 781 aaKnown RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 CASP14P31944 242 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 CYLC1P35663 651 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ELK3P41970 407 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 PTGER3P43115 390 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ACADSBP45954 432 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 HNRNPFP52597 415 aaKnown RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ZNF131P52739 623 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ZNF239Q16600 458 aaKnown RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ANKRD55Q3KP44 614 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 LIPJQ5W064 366 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ZNF774Q6NX45 483 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 C1orf186Q6ZWK4 172 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 APTXQ7Z2E3 356 aaKnown RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 RABEPKQ7Z6M1 372 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 KRT222Q8N1A0 295 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 CEP112Q8N8E3 955 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ICA1LQ8NDH6 482 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 FBXO25Q8TCJ0 367 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 TBCKQ8TEA7 893 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 PSMB7Q99436 277 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 NAP1L3Q99457 506 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ST6GALNAC5Q9BVH7 336 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 NUP58Q9BVL2 599 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 RBM24Q9BX46 236 aaKnown RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 TRPV6Q9H1D0 765 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 NDUFA13Q9P0J0 144 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 TRIM10Q9UDY6 481 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 FETUBQ9UGM5 382 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ATP6V0A2Q9Y487 856 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ATG4BQ9Y4P1 393 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 NRXN2Q9P2S2 1712 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ABCB11O95342 1321 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 IGKV6D-41A0A0C4DH26 115 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 PVALEFA0A1B0GWK0 134 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 RNF212BA8MTL3 300 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 ATP8B1O43520 1251 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 GPRIN2O60269 458 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 NME2P1O60361 137 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 ZNF354AO60765 605 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 ERLIN1O75477 346 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 OAS1P00973 400 aaKnown RBP3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 GYPCP04921 128 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 MBL2P11226 248 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 VDRP11473 427 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 CCNE1P24864 410 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 CASP1P29466 404 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 NDST1P52848 882 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 FKBP1AP62942 108 aaKnown RBP3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 CBX1P83916 185 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 CDKL1Q00532 357 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 LRRC63Q05C16 580 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 GABPB1Q06547 395 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 IL17AQ16552 155 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 C15orf32Q32M92 178 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 HIGD2BQ4VC39 106 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 VWA2Q5GFL6 755 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 HERC4Q5GLZ8 1057 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 HIST2H2AA3Q6FI13 130 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 ADAMTSL2Q86TH1 951 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 SLC22A16Q86VW1 577 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 HIPK1Q86Z02 1210 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 CSGALNACT2Q8N6G5 542 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 TMEM185AQ8NFB2 350 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 OR52E1Q8NGJ3 308 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 URGCPQ8TCY9 931 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 MGARPQ8TDB4 240 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 CNOT6LQ96LI5 555 aaKnown RBP3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 ACCSQ96QU6 501 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 NAPGQ99747 312 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 TTYH2Q9BSA4 534 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 CARD6Q9BX69 1037 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 TSGA10Q9BZW7 698 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 TRIM9Q9C026 710 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 NT5C3AQ9H0P0 336 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 VAT1LQ9HCJ6 419 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 CLEC5AQ9NY25 188 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 TAS2R16Q9NYV7 291 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 DHRS4-AS1Q9P1J3 65 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 RCOR3Q9P2K3 495 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 TUBGCP4Q9UGJ1 667 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 FAM153AQ9UHL3 310 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 IKZF3Q9UKT9 509 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 SLC6A5Q9Y345 797 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 V9GYY5 206 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 ANKRD31Q8N7Z5 1873 aa3.49□□□□□ -1.85
HMGB3P6-201ENST00000444896 MYH4Q9Y623 1939 aa3.48□□□□□ -1.85
HMGB3P6-201ENST00000444896 A0A0A6YYD4 124 aa3.48□□□□□ -1.85
HMGB3P6-201ENST00000444896 TRBV2A0A0J9YWF9 115 aa3.48□□□□□ -1.85
HMGB3P6-201ENST00000444896 CTAGE15A4D2H0 777 aa3.48□□□□□ -1.85
HMGB3P6-201ENST00000444896 TRIM49BA6NDI0 452 aa3.48□□□□□ -1.85
HMGB3P6-201ENST00000444896 SLC9B1P1A6NJY1 282 aa3.48□□□□□ -1.85
HMGB3P6-201ENST00000444896 PP2D1A8MPX8 630 aa3.48□□□□□ -1.85
HMGB3P6-201ENST00000444896 ZBTB5O15062 677 aa3.48□□□□□ -1.85
HMGB3P6-201ENST00000444896 KLRC4O43908 158 aa3.48□□□□□ -1.85
HMGB3P6-201ENST00000444896 SH3BGRLO75368 114 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms